Query= MSMg01no349_b17.b1 MSMg01no349_b17.b1 CHROMAT_FILE:
MSMg01no349_b17.b1 PHD_FILE: MSMg01no349_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:37 2005
(580 letters)
>mm_chr10_62411580_62412559
Length = 980
Score = 1069 bits (553), Expect = 0.0
Identities = 571/577 (98%)
Strand = Plus / Plus
Query: 4 ggaattctcccccttgtctttcttaagtttaaggttttcagatcaaacaagactagaaaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcccccttgtctttcttaagtttaaggttttcagatcaaacaagactagaaaa 263
Query: 64 ccagaagattgacttcggcagagcacagccaactctcggctgcttatctctcggctctga 123
||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 264 ccagaagattgacttgggcagaacacagccaactctcggctgcttatctcgcggctctga 323
Query: 124 taggatggtttctatgttttcgatttagacttcggaagaaggcggacgctttgtttccag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 taggatggtttctatgttttcgatttagacttcggaagaaggcggacgctttgtttccag 383
Query: 184 agacagttctgagccgaggagtggataaccggtacctggtgctagctgttgagacctcgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agacagttctgagccgaggagtggataaccggtacctggtgctagctgttgagacctcgc 443
Query: 244 agaatgaaagaggagctgaggagaagcgcttgcacatcacggcgtcccaggaccgagagc 303
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 444 agaatgaaagaggagccgaggagaagcgcttgcacgtcacggcgtcccaggaccgagagc 503
Query: 304 acgaagttctgtgcatcctgaggaatggctggtgatttgcatttttgactttgagccatg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acgaagttctgtgcatcctgaggaatggctggtgatttgcatttttgactttgagccatg 563
Query: 364 atttggtggtctggtggtttgttgtttttgtttgctgtcacgtagcccaggctgtacctg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atttggtggtctggtggtttgttgtttttgtttgctgtcacgtagcccaggctgtacctg 623
Query: 424 aactgatggtatctcgcctccacttccttacctccaaatgctgcgattacctggcatgat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aactgatggtatctcgcctccacttccttacctccaaatgctgcgattacctggcatgat 683
Query: 484 ttggtagagtctggaggacaccacctgacctaaggccttgagtgtgccaggcaaactaag 543
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttggtagcgtctggaggacaccacctgacctaaggccttgagtgtgccaggcaaactaag 743
Query: 544 ctccacccctaagttcccgtcccaactctaggacatc 580
|||||||||||||||||||||||||||||||||||||
Sbjct: 744 ctccacccctaagttcccgtcccaactctaggacatc 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_b17.g1 MSMg01no349_b17.g1 CHROMAT_FILE:
MSMg01no349_b17.g1 PHD_FILE: MSMg01no349_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:37 2005
(447 letters)
>mm_chr10_62627486_62628332
Length = 847
Score = 835 bits (432), Expect = 0.0
Identities = 444/448 (99%), Gaps = 1/448 (0%)
Strand = Plus / Minus
Query: 1 actctgtagaccaggatggcctggaactcacagagatctgcctgcctctgcctcccc-ag 59
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 628 actctgtagaccaggatggcctggaactcacagagatctgcctgcctctgcctccccgag 569
Query: 60 tgctggaagtaagctgcacatacccctcttcctcatgggccaaaaatccatcctagggtc 119
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 568 tgctggaagtaagctgcacatacccctcttcctcatgggccaataatccatcctagggtc 509
Query: 120 acgtctggctacagcgaaggttagaaagcagtcttgctacgcagtagctgtgagaagaag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 acgtctggctacagcgaaggttagaaagcagtcttgctacgcagtagctgtgagaagaag 449
Query: 180 aaaggagactttcctattgcagagctgatcaagtgctgggaaggcatgcaattttgcttc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 aaaggagactttcctattgcagagctgatcaagtgctgggaaggcatgcaattttgcttc 389
Query: 240 ttagaatacatgctgcctgtctaggagaaacattcattgtgagtccgtatgtcctccctg 299
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 388 ttagaatacatgctgcctgtctaggagaaacattcattgtgtgtccgtatgtcctccctg 329
Query: 300 gttgtacagagattttacaggcatctctactgagcacagcaaaagtgaggatactcaaag 359
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gttgtacagagatttcacaggcatctctactgagcacagcaaaagtgaggatactcaaag 269
Query: 360 catctgacgggagttaccccctttaacccgactgagagctttaccagccaagtgattatt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 catctgacgggagttaccccctttaacccgactgagagctttaccagccaagtgattatt 209
Query: 420 tacccattttagagatgaagaagctgag 447
||||||||||||||||||||||||||||
Sbjct: 208 tacccattttagagatgaagaagctgag 181
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
