Query= MSMg01no349_e13.b1 MSMg01no349_e13.b1 CHROMAT_FILE:
MSMg01no349_e13.b1 PHD_FILE: MSMg01no349_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:51 2005
(596 letters)
>mm_chr10_39362062_39363058
Length = 997
Score = 1064 bits (550), Expect = 0.0
Identities = 584/599 (97%), Gaps = 7/599 (1%)
Strand = Plus / Plus
Query: 5 gaattcactctgtataccaggctggtctcanactcacagagatctgcctgactctgcccc 64
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 205 gaattcactctgtagaccaggctggtctcaaactcacagagatctgcctgactctgcccc 264
Query: 65 caaagtgctgggactaaaggtgtgtgctaccactgcctggctgtgattagtttttatttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caaagtgctgggactaaaggtgtgtgctaccactgcctggctgtgattagtttttatttg 324
Query: 125 aaggttttttttt-tccctgtaattcattaaaaaatgaaagtacctaaaattttaaagat 183
||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 325 aaggtttttttttccccctgtaattcattaaaaaatgaaagtacctaaaaatttaaagat 384
Query: 184 atgcctacaatttatgtaatccaacttcacaactccctagaataacgtttcactctctca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgcctacaatttatgtaatccaacttcacaactccctagaataacgtttcactctctca 444
Query: 244 tttccagaataagacagtgctagggcaactgtgacataaaagctgagccgtgagccgtga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttccagaataagacagtgctagggcaactgtgacataaaagctgagccgtgagccgtga 504
Query: 304 ggcagcatacaagagttcactttttccttcttcaaatataaacatacggattctgactgc 363
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggcagcatacaagagctcactttttccttcttcaaatataaacatacggattctgactgc 564
Query: 364 ccctggagaatagccacagttttaacctttaaacgcctctaatcaaggcaattcaggggg 423
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 565 ccctggagaatagccacagttttaacctttaaatgcctctaatcaaggcaattcaggggg 624
Query: 424 gatttaaatgccccttgactcttatccgtagaagcctgtgtctgtgagcagctatgtgtt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gatttaaatgccccttgactcttatccgtagaagcctgtgtctgtgagcagctatgtgtt 684
Query: 484 atacttgacacattgggatcctcttagtgaaatggagcaaagagtcatttaaggagaatt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atacttgacacattgggatcctcttagtgaaatggagcaaagagtcatttaaggagaatt 744
Query: 544 taattaaaacaacaacaacgacaacaa------gagcagccacctcagcataccggttt 596
||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||
Sbjct: 745 taattaaaacaacaacaacaacaacaacaacaagagcagccaccgcagcataccggttt 803
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 997
Length adjustment: 10
Effective length of query: 586
Effective length of database: 987
Effective search space: 578382
Effective search space used: 578382
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_e13.g1 MSMg01no349_e13.g1 CHROMAT_FILE:
MSMg01no349_e13.g1 PHD_FILE: MSMg01no349_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:51 2005
(519 letters)
>mm_chr10_39540924_39541842
Length = 919
Score = 988 bits (511), Expect = 0.0
Identities = 517/519 (99%)
Strand = Plus / Minus
Query: 1 ttcgtatctgattttaagtttgtttagtccactctcatcagtgatgctctcaagagaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 ttcgtatctgattttaagtttgtttagtccactctcatcagtgatgctctcaagagaatg 660
Query: 61 ggccatacttctgttctcccccgaagacgggagcaagtcacagttttccgttagcgaaga 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 659 ggccatacttctgttctcccccgaagacggcagcaagtcacagttttccgttagcgaaga 600
Query: 121 gggaaatacaccactgagagatgtgctgtttcccttttcgtttccttcagaggataattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gggaaatacaccactgagagatgtgctgtttcccttttcgtttccttcagaggataattt 540
Query: 181 acgttttgaatgatttaagtcagcaaagttgaaagagtttttccccaatatagtctcact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 acgttttgaatgatttaagtcagcaaagttgaaagagtttttccccaatatagtctcact 480
Query: 241 aatgtgacggttcacatgtatgcaagaggcatccttttcaatctttctcatgttcgagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 aatgtgacggttcacatgtatgcaagaggcatccttttcaatctttctcatgttcgagta 420
Query: 301 ctttctacttggtacttgtcttgtaacagatggaatatcttcttcataatcaaaaacact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ctttctacttggtacttgtcttgtaacagatggaatatcttcttcataatcaaaaacact 360
Query: 361 actttcacaggaagataccggcaaagacttgtctttcttacaaatctctttgtgagaatt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 359 actttcacaggaagataccggcaaagacttgtctttcttacaaatctctttgtgggaatt 300
Query: 421 atctgaatgaacagtactacttaaagagccagagtacttcatggagtaagtactttcctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 atctgaatgaacagtactacttaaagagccagagtacttcatggagtaagtactttcctt 240
Query: 481 tgtaaaagtgactgaattatctcgacctttttctgtact 519
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tgtaaaagtgactgaattatctcgacctttttctgtact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
