Query= MSMg01no350_f24.b1 MSMg01no350_f24.b1 CHROMAT_FILE:
MSMg01no350_f24.b1 PHD_FILE: MSMg01no350_f24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:17 2005
(416 letters)
>mm_chr10_128193276_128194091
Length = 816
Score = 743 bits (384), Expect = 0.0
Identities = 406/416 (97%), Gaps = 6/416 (1%)
Strand = Plus / Plus
Query: 4 ggaattcagagttt---ttcctttagtttctgatactgtttactaattgtaacttgggga 60
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagagtttagatt---ttagtttctgatactgtttactaattgtaacttgggga 260
Query: 61 atgttaataaacttctcatcatgtgtaaactggaataaactggaatgatatttcgtggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgttaataaacttctcatcatgtgtaaactggaataaactggaatgatatttcgtggag 320
Query: 121 ttgtgaaaattaaataagatgcctataaatattgagccctgtaattgttgccgttatctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtgaaaattaaataagatgcctataaatattgagccctgtaattgttgccgttatctt 380
Query: 181 ctgagaattgacatttgttctgctcagatactaactccctgtgtgctcagtatgcagcgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgagaattgacatttgttctgctcagatactaactccctgtgtgctcagtatgcagcgt 440
Query: 241 ggtagagtgctcacctggcttgcacaaagccctggtttttttgtacaccagattgtggtg 300
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 441 ggtagagtgctcacctggcttgcacaaagccctgggttcagtgtacaccagattgtggtg 500
Query: 301 atgcacatctgtaatcctagaactgaggaggcagatgcagaagaatcataaatccaagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgcacatctgtaatcctagaactgaggaggcagatgcagaagaatcataaatccaagga 560
Query: 361 catcctcagctgcataacaagtctgaggctgacctgggcaacataagaccttgaag 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catcctcagctgcataacaagtctgaggctgacctgggcaacataagaccttgaag 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no350_f24.g1 MSMg01no350_f24.g1 CHROMAT_FILE:
MSMg01no350_f24.g1 PHD_FILE: MSMg01no350_f24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:17 2005
(378 letters)
>mm_chr10_128342237_128343014
Length = 778
Score = 708 bits (366), Expect = 0.0
Identities = 374/378 (98%), Gaps = 3/378 (0%)
Strand = Plus / Minus
Query: 1 caaatcaacaaaggctacatagagtccctggttcaaggaaaaaaaaaaaaaacaaaaaca 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 586 caaatcaacaaaggctacatagagtccctggttcaagg---aaaaaaaaaaacaaaaaca 530
Query: 61 aacaaacaaaaaagccacgggtgtgcccatgtcaataatacacattattcagtacctcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 aacaaacaaaaaagccacgggtgtgcccatgtcaataatacacattattcagtacctcat 470
Query: 121 ctgccccttacacactcacttcacttcccacgagatgtaaatcttctataaaagaaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ctgccccttacacactcacttcacttcccacgagatgtaaatcttctataaaagaaaatg 410
Query: 181 caaagatcaggcaatcacctaagctaagaagcagttttatgaattatgtcctcccagcgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 caaagatcaggcaatcacctaagctaagaagcagttttatgaattatgtcctcccagcgg 350
Query: 241 aatactctaggcacatcctggacctggcaggatatgggtaagaagtcaaaatgccaaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aatactctaggcacatcctggacctggcaggatatgggtaagaagtcaaaatgccaaaga 290
Query: 301 aaagagtattcatgacctttctttctttctttctttctttctttctttctttctttcttt 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 aaagagtattcatgacttttctttctttctttctttctttctttctttctttctttcttt 230
Query: 361 ctttctttctttctttct 378
||||||||||||||||||
Sbjct: 229 ctttctttctttctttct 212
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
