Query= MSMg01no351_f04.b1 MSMg01no351_f04.b1 CHROMAT_FILE:
MSMg01no351_f04.b1 PHD_FILE: MSMg01no351_f04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:32 2005
(618 letters)
>mm_chr10_114857587_114858602
Length = 1016
Score = 1152 bits (596), Expect = 0.0
Identities = 609/614 (99%), Gaps = 2/614 (0%)
Strand = Plus / Plus
Query: 5 gaattcaatagtctcccttcaaaactttatgatccatctaatgctaatccttcaagaatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatagtctcccttcaaaactttatgatccatctaatgctaatccttcaagaatt 264
Query: 65 gttaacacagaaccgtttgtaatgccatggcaagcagctcaagatgtcaagaccaatccc 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttaacacagaaccgtttgtaatgccatggcaagcagctcaagatgtcaagaccaatcct 324
Query: 125 gacttattgttagcagtgtttgaaggtaagtgatgtttataaattataatatcaagcatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gacttattgttagcagtgtttgaaggtaagtgatgtttataaattataatatcaagcatt 384
Query: 185 acaagtcacaaaaccgttgttctgaacatcagttcatttatttattatcattctttataa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acaagtcacaaaaccgttgttctgaacatcagttcatttatttattatcattctttataa 444
Query: 245 aatgggatagcttatgctgtaattgcacttcattatctaagtatttttactattactata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aatgggatagcttatgctgtaattgcacttcattatctaagtatttttactattactata 504
Query: 305 ttatttgtcattagatctatgaactgaaaatctacactatggctttttttaattatggca 364
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 505 ttatttgtcattagatatatgaactgaaaatctacactgtggctttttttaattatggca 564
Query: 365 aaggatgcaagattaaggtattgttattaagtgcatgtgcatctgattgcacacacttac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaggatgcaagattaaggtattgttattaagtgcatgtgcatctgattgcacacacttac 624
Query: 425 tgataacataatcaggttagaggagttgattgaattgtagaactaagtttgcttgttttt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgataacataatcaggttagaggagttgattgaattgtagaactaagtttgcttgttttt 684
Query: 485 tattttgttctgacagtcttttaaggatgtgttttgatttttttttaatgtagttaatat 544
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 685 tattttgttctgacagtcttttaaggatgtgttttgattttttt--aatgtagttaatat 742
Query: 545 tttatccaaagttaattttatgactattatatgttaaacatatatctgccattgaacatg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tttatccaaagttaattttatgactattatatgttaaacatatatctgccattgaacatg 802
Query: 605 caattgagtttaaa 618
||||||||||||||
Sbjct: 803 caattgagtttaaa 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1016
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1006
Effective search space: 611648
Effective search space used: 611648
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_f04.g1 MSMg01no351_f04.g1 CHROMAT_FILE:
MSMg01no351_f04.g1 PHD_FILE: MSMg01no351_f04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:32 2005
(526 letters)
>mm_chr10_114912193_114913117
Length = 925
Score = 808 bits (418), Expect = 0.0
Identities = 445/456 (97%), Gaps = 5/456 (1%)
Strand = Plus / Minus
Query: 71 aattaattttttagaaaatttgtatttatttattttatgtatgtgagtacactgtcactc 130
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 aattgattttttagaagatttgtatttatttattttatgtatgtgagtacactgtcactc 866
Query: 131 tcttcatacacaccagaagagggtgttggatcccattacagatggttgtgaaggtggttg 190
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 865 tcttcatacacaccagaagagggtattggatcccattacagatggttgtgaaggtggttg 806
Query: 191 ctgggaattgaactcaggacctctggaagagtagttggtgctcctaaccgctgagccatc 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ctgggaattgaactcaggacctctggaagagtagttggtgctcctaaccgctgagccatc 746
Query: 251 tctccagccccctagactagtttttttttttttaaacctctcctcctttaaacccatttt 310
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 745 tctccagccccctagactaattttttttt----aaacctctcctcctttaaacccatttt 690
Query: 311 ccaaaatctctttgggagttaatttacttttcagttgtctacacagctgttctcgttgac 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ccaaaatctctttgggagttaatttacttttcagttgtctacacagctgttctcgttgac 630
Query: 371 tctgacgtaactgacttatcaatcaagcctaagatgataattgtccacattaaaatagtt 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tctgacgtaactgacttatcaatcaagcctaagatgataattgtccacattaaaatagtt 570
Query: 431 ggtcaacattaccaatcgtgggcaatagaaaaagtctgatcactagtccctgtaactaaa 490
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 569 ggtcaacattaccaatcgtgggcaata-aaaaagtctgatcactagtccctgtaactaaa 511
Query: 491 atcctttctttctgacctatagcctggtcctgtgac 526
|||||||||| ||||||||||||| |||||||||||
Sbjct: 510 atcctttcttcctgacctatagcccggtcctgtgac 475
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 925
Length adjustment: 10
Effective length of query: 516
Effective length of database: 915
Effective search space: 472140
Effective search space used: 472140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
