Query= MSMg01no351_f22.b1 MSMg01no351_f22.b1 CHROMAT_FILE:
MSMg01no351_f22.b1 PHD_FILE: MSMg01no351_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:36 2005
(517 letters)
>mm_chr10_6562728_6563639
Length = 912
Score = 903 bits (467), Expect = 0.0
Identities = 500/513 (97%), Gaps = 5/513 (0%)
Strand = Plus / Minus
Query: 5 gaattcctttcccccccccccaacccagttggcatattgaaagaaagcattttcctcttt 64
||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 712 gaattcc-ttaccccccccccaacccagttggcatatt----gaaagcattttcctcttt 658
Query: 65 agggttttcagctactctatggaaatactatccaacaccttttgtggggggtctgcatgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 agggttttcagctactctatggaaatactatccaacaccttttgtggggggtctgcatgc 598
Query: 125 tgctattactaagctaaaaggtaggttctgtatctggaacagttgaatagctaatatctt 184
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 597 tgctattactaagctaaaaggtaggctctgtatctggaacagttgaatagctaatatctt 538
Query: 185 gctttgaagactcaaattcagctcagcatttttgaatgaagtccctggacctgggatcta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gctttgaagactcaaattcagctcagcatttttgaatgaagtccctggacctgggatcta 478
Query: 245 aagctgagcagtggcttctgcctttaagaagttccagttgtaatcaaagaggcaacggtg 304
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 aagctaagcagtggcttctgcctttaagaagttccagttgtaatcaaagaggcaacggtg 418
Query: 305 ggaggaagcaccctgctcatacttgttggggctgtcttgaaggtcaagaatcagccaagg 364
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ggaggaagcgccctactcatacttgttggggctgtcttgaaggtcaagaatcagccaagg 358
Query: 365 ggagaaggcaagacgatactaagagaagcacaccatatcaggcagagacaggagcaggat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ggagaaggcaagacgatactaagagaagcacaccatatcaggcagagacaggagcaggat 298
Query: 425 agagtccaagggactgtgagcgggcacagcagacaggccagcagtgcaggaggaagggcc 484
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 297 agagtccaagggactgtgagcaggcacagcagacaggccagcagtgcagaaggaagggcc 238
Query: 485 tggggcttgtgggagtcatgagtgcagctggcc 517
||||||||| |||||||||||||||||||||||
Sbjct: 237 tggggcttgagggagtcatgagtgcagctggcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 912
Length adjustment: 10
Effective length of query: 507
Effective length of database: 902
Effective search space: 457314
Effective search space used: 457314
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_f22.g1 MSMg01no351_f22.g1 CHROMAT_FILE:
MSMg01no351_f22.g1 PHD_FILE: MSMg01no351_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:36 2005
(479 letters)
>mm_chr10_6418906_6419784
Length = 879
Score = 866 bits (448), Expect = 0.0
Identities = 469/476 (98%)
Strand = Plus / Plus
Query: 1 ttcttttatgtttcattgtttgatttgaagcccaaagaagtttcatacaaagcaaaggtg 60
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 ttcttctatgtttcattgtttgatttgaagcccaaagaagtttcatacaaagcaaaggcg 260
Query: 61 attgattagctgtgtgattgtttgcttgcttgctttgtagaactggatggagtcttagca 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 attgattagctgtgtgattgtttgcttgcttgctttctagaactggatggagtcttagca 320
Query: 121 tcccaggcaaatcctctgccctccattgatcttttcatcctcttcaccatttctcccttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcccaggcaaatcctctgccctccattgatcttttcatcctcttcaccatttctcccttt 380
Query: 181 gcgatttagttgttggagaaaccagaccattcattctgaccacatggtcaaagtctctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcgatttagttgttggagaaaccagaccattcattctgaccacatggtcaaagtctctgg 440
Query: 241 ggtcctggtgacacacaacggtcccctttctgcgctctgtccactgtactcctgagggtc 300
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 gttcctggtgacacacaacggtcccctttctgcgctctgtccactgtactcccgagggtc 500
Query: 301 aacagaggtttgcttaggttgaggttttataatttggcaggatgcaccatagggttgccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacagaggtttgcttaggttgaggttttataatttggcaggatgcaccatagggttgccc 560
Query: 361 catgctcccagcaggagctgcaacatctgatgtcttttttgtgatggtaacaggcgctgg 420
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 561 catgctcccatcaggagctgcaacatctgatgtcttttttgtgatggtaacaggtgctgg 620
Query: 421 tgattactgcacaggtctatcagaggctatatataatggtgatatttctattttgg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgattactgcacaggtctatcagaggctatatataatggtgatatttctattttgg 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
