Query= MSMg01no351_h21.b1 MSMg01no351_h21.b1 CHROMAT_FILE:
MSMg01no351_h21.b1 PHD_FILE: MSMg01no351_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:45 2005
(507 letters)
>mm_chr10_66809455_66810361
Length = 907
Score = 760 bits (393), Expect = 0.0
Identities = 450/503 (89%), Gaps = 52/503 (10%)
Strand = Plus / Minus
Query: 5 gaattcaattcccagtaaccacatggtggctcacaaccatctgtaatgggatctgatgcc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 gaattcaattcccagcaaccacatggtggctcacaaccatctgtaatgggatctgatgcc 829
Query: 65 ctcttctggtgtgtctgaggacagtgactgtgtactcatatatataaaataaaataaaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 ctcttctggtgtgtctgaggacagtgactgtgtactcatatatataaaataaaataaaat 769
Query: 125 ctttttaagaaagaaaggaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaa 184
||||||||||||||||||
Sbjct: 768 ctttttaagaaagaaagg------------------------------------------ 751
Query: 185 gaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagctatagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ----------aagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagctatagg 701
Query: 245 ctcaaatatcttaagattatagatgtataaaattataacaaaaaccttataaggtgaatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ctcaaatatcttaagattatagatgtataaaattataacaaaaaccttataaggtgaatt 641
Query: 305 cagcagcacgctgtcacccagaaatgcaaggatgtttcaacacaagaaaaatcaatccat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 cagcagcacgctgtcacccagaaatgcaaggatgtttcaacacaagaaaaatcaatccat 581
Query: 365 gaatataatcaattaatatagcatattaataatctcaggaaacgtaagagaggataacct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gaatataatcaattaatatagcatattaataatctcaggaaacgtaagagaggataacct 521
Query: 425 cagtggtcagagaaaagcattcactgggatctagcgtgtgttcctggggacgggggagat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 cagtggtcagagaaaagcattcactgggatctagcgtgtgttcctggggacgggggagat 461
Query: 485 ctagtgtgtgttcctggggacgg 507
|||||||||||||||||||||||
Sbjct: 460 ctagtgtgtgttcctggggacgg 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 74
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_h21.g1 MSMg01no351_h21.g1 CHROMAT_FILE:
MSMg01no351_h21.g1 PHD_FILE: MSMg01no351_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:45 2005
(423 letters)
>mm_chr10_66689115_66689937
Length = 823
Score = 810 bits (419), Expect = 0.0
Identities = 422/423 (99%)
Strand = Plus / Plus
Query: 1 tgtatccgaaattattaagccatgttctgtcaacttaatagcctctacatctaatgatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtatccgaaattattaagccatgttctgtcaacttaatagcctctacatctaatgatat 260
Query: 61 agaaaatcgtgcagatggcagagtcgctgtagataaatatggaagagatgagaaagtcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaaatcgtgcagatggcagagtcgctgtagataaatatggaagagatgagaaagtcag 320
Query: 121 caggagaaaagccaaaagaacttacgaatctggctctgaaagtggagactcagatgagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggagaaaagccaaaagaacttacgaatctggctctgaaagtggagactcagatgagag 380
Query: 181 tgaaagcaagtcggagcagaggactaaacggcagccgaagccaacttataaaaagaagca 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgaaagcaagtcggagcagaggactaaacggcagccgaagccaacttataaaaagaagca 440
Query: 241 gaacgacctgcagaagaggaaaggcgaggtcgaagaggactcgaagcctaatggagttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaacgacctgcagaagaggaaaggcgaggtcgaagaggactcgaagcctaatggagttct 500
Query: 301 cagcaggagcgccaaggacaaaagtaaactgaagttgcagaacagtaatagcggtgagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagcaggagcgccaaggacaaaagtaaactgaagttgcagaacagtaatagcggtgagta 560
Query: 361 aatacattgatttatcgcaaataaaatgggccacgggtcctcgcagtaaggatgtggctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatacattgatttatcgcaaataaaatgggccacgggtcctcgcagtaaggatgtggctc 620
Query: 421 cat 423
|||
Sbjct: 621 cat 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
