Query= MSMg01no352_j16.b1 MSMg01no352_j16.b1 CHROMAT_FILE:
MSMg01no352_j16.b1 PHD_FILE: MSMg01no352_j16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:13 2005
(468 letters)
>mm_chr10_72716927_72717794
Length = 868
Score = 845 bits (437), Expect = 0.0
Identities = 458/465 (98%)
Strand = Plus / Minus
Query: 4 ggaattcagttgttaccagtttactactatctctgctatagatgggcttgaaaaaggcca 63
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 ggaattcagttgatagaagtttactactatctctgctatagatgggcttgaaaaaggcca 609
Query: 64 cagtgtgctacactgcccaggagaatgctattattatctactaagaaatcaggtgtacta 123
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 608 cagtgtgctacactgcccaggagaatgctattattatctgctaagaaatcaggtgtacta 549
Query: 124 aaacatcacaagccatagtagcagtgaaaaagaggtccattcaagaatctgcacagtgga 183
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 548 aaacatcacaagccatagtagcagtgaaaacgaggtccattcaagaatctgcacagtgga 489
Query: 184 cttgagggccaggtgcccatagccttatctgaaacaggcctttactaatgtagccatagt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cttgagggccaggtgcccatagccttatctgaaacaggcctttactaatgtagccatagt 429
Query: 244 aagaattttgagacaaagataatgacatagtgaccttcttctgagtgccattatcctccc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 aagaattttgagacaaagataatgacatagtgaccttcttctgagtgccattatcctccc 369
Query: 304 aaatgatcatctaggagacaaacctcaaagacttcatcacatgcagaccaggaggactat 363
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 368 aaatgatcatctaggagacaaacctcaaagacttcatcacacgcagaccaggaggactat 309
Query: 364 gagcgtaaccagagagatgaggcaacaggccaagaaatggtgacatcggccaaagcctgg 423
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 308 gagcgtaaccagagagatgaggcaaaaggccaagaaatggtgacatcggccaaagcctgg 249
Query: 424 aaatggtaaaggaagataaaaccctagggcttttggaggaggggg 468
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aaatggtaaaggaagataaaaccctagggcttttggaggaggggg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_j16.g1 MSMg01no352_j16.g1 CHROMAT_FILE:
MSMg01no352_j16.g1 PHD_FILE: MSMg01no352_j16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:13 2005
(432 letters)
>mm_chr10_72521254_72522084
Length = 831
Score = 828 bits (428), Expect = 0.0
Identities = 431/432 (99%), Gaps = 1/432 (0%)
Strand = Plus / Plus
Query: 1 tataaaatccatcaattgaattttcagcgcctccgggtctgaaactaccaatctctgtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tataaaatccatcaattgaattttcagcgcctccgggtctgaaactaccaatctctgtta 260
Query: 61 ctcagaatatataacaattcttggcaactttattcctcctaagaataggaatttaaattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcagaatatataacaattcttggcaactttattcctcctaagaataggaatttaaattg 320
Query: 121 caatataacatacataatttttagatttctccactcaaagaaaatcatgaaaatgtactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caatataacatacataatttttagatttctccactcaaagaaaatcatgaaaatgtactt 380
Query: 181 ttttttttctgagacttttccagaaacaggtgctatgatagccaaaactatcaaaagtag 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttttt-ctgagacttttccagaaacaggtgctatgatagccaaaactatcaaaagtag 439
Query: 241 aattatcctgtcttaagcagttaacatattatataaatatctatcaagtacctactctgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aattatcctgtcttaagcagttaacatattatataaatatctatcaagtacctactctgt 499
Query: 301 atcatatacttagagtttcatttatgtctttatggttcttctaacaaatgctgtcctgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atcatatacttagagtttcatttatgtctttatggttcttctaacaaatgctgtcctgtt 559
Query: 361 tgttttaccatgtgttttcttcttcagtgatcaaaatatcagagaactgaaacaaatgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgttttaccatgtgttttcttcttcagtgatcaaaatatcagagaactgaaacaaatgtt 619
Query: 421 caaatatccaca 432
||||||||||||
Sbjct: 620 caaatatccaca 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 831
Length adjustment: 9
Effective length of query: 423
Effective length of database: 822
Effective search space: 347706
Effective search space used: 347706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
