Query= MSMg01no353_a21.b1 MSMg01no353_a21.b1 CHROMAT_FILE:
MSMg01no353_a21.b1 PHD_FILE: MSMg01no353_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:48 2005
(516 letters)
>mm_chr10_48303535_48304449
Length = 915
Score = 899 bits (465), Expect = 0.0
Identities = 501/513 (97%), Gaps = 1/513 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaagacaagggccaggagacagaaactgaagtagaggccatcactaggaattgt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaagacaagggccaggagacagaaactgaagtagaggccatcactaggaattgt 263
Query: 64 aatattgactttctcaccatggctttttcagcttacttccttgtataattcaaaatcacc 123
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 264 aatactgactttctcaccatggctttttcagctcacttccttgtataattcaaaatcacc 323
Query: 124 aacatagaataatactacccaatgtggtttggtacctattgcttaaaacttaaaatcaag 183
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aacatagaataaaactacccaatgtggtttggtacctattgcttaaaacttaaaatcaag 383
Query: 184 aaaataccctacagacttgcataaaggacaatttgatagagacacttctcactcaatgtt 243
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 384 aaaataccctacagacttgcataaaggacaatttgatagagacacttcacactcaatgtt 443
Query: 244 ctctttttcccagagaaagtagctgttttatattaacaacaagaaaaaaattaacaagca 303
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 444 ctctttttcccagagaaagtaactgttttatattaacaacaataaaaaaattaacaagca 503
Query: 304 caattgaccccttgttaactagacacacaaatacctctctgtttaaaccaatacccttcc 363
|||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||
Sbjct: 504 caattgaccccttgttaactggacacacaaatacatctctgtttaatccaatacccttcc 563
Query: 364 atacattgtttatcttcaaaacgatatattaatattactgtagttttgaaagtaaaatat 423
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 564 atacattgtttatcttcaaaaccatatattaatattactgtagttttgaaagtaaaatat 623
Query: 424 aattacatttcttttttcccattatttttcccagtactttgcatatgccatcacttgcct 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aattacatttcttttttcccattatttttcccagtactttgcatatgccatcacttgcct 683
Query: 484 ttctctcgatcacattgactctctttttttaat 516
|||||||||||||||||| ||| ||||||||||
Sbjct: 684 ttctctcgatcacattgattct-tttttttaat 715
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 915
Length adjustment: 10
Effective length of query: 506
Effective length of database: 905
Effective search space: 457930
Effective search space used: 457930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_a21.g1 MSMg01no353_a21.g1 CHROMAT_FILE:
MSMg01no353_a21.g1 PHD_FILE: MSMg01no353_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:48 2005
(418 letters)
>mm_chr10_48511337_48512155
Length = 819
Score = 756 bits (391), Expect = 0.0
Identities = 412/419 (98%), Gaps = 1/419 (0%)
Strand = Plus / Minus
Query: 1 aatttgtgattgcttggcctagggtaagcctggacactcgagcagaagctggaggtggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aatttgtgattgcttggcctagggtaagcctggacactcgagcagaagctggaggtggta 560
Query: 61 cagagtgcctcacctgtgagcagttgaagcagagagaggccaaggacaagattcttttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cagagtgcctcacctgtgagcagttgaagcagagagaggccaaggacaagattcttttca 500
Query: 121 atgacacataa-tggggaaaaattcctacatcttggactaaccttccaatcttttccaga 179
|||||| |||| ||| ||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 499 atgacatataattggtgaacacttcctacatcttggactaaccttccaatcttttccaga 440
Query: 180 accattcaacatcatggcattagctcttcatcttgaaatcctggttacattcatagcaaa 239
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 accattcgacatcatggcattagctcttcatcttgaaatcctggttacattcatagcaaa 380
Query: 240 ctgcaggcatccaaaggattggaggcaatttgaataggaacttagaacatagcatttgct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ctgcaggcatccaaaggattggaggcaatttgaataggaacttagaacatagcatttgct 320
Query: 300 ttcctttacaactctattcaataaagtgtatgcagaccatgtacaagtatttaaataaaa 359
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttcctttacacctctattcaataaagtgtatgcagaccatgtacaagtatttaaataaaa 260
Query: 360 ctcatgattatacaaattatcttctctaatctttcctcttttgctcattttcttattta 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ctcatgattatacaaattatcttctctaatctttcctcttttgctcattttcttattta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 819
Length adjustment: 9
Effective length of query: 409
Effective length of database: 810
Effective search space: 331290
Effective search space used: 331290
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
