Query= MSMg01no353_c19.b1 MSMg01no353_c19.b1 CHROMAT_FILE:
MSMg01no353_c19.b1 PHD_FILE: MSMg01no353_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:58 2005
(559 letters)
>mm_chr10_113263948_113264906
Length = 959
Score = 818 bits (423), Expect = 0.0
Identities = 435/439 (99%), Gaps = 1/439 (0%)
Strand = Plus / Plus
Query: 5 gaattctgataca-ctatctacctcatagtatacacctgcagcggacttgatttgcatcc 63
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctgatacaacaatctacctcatagtatacacctgcagcggacttgatttgcatcc 263
Query: 64 ttttctttgctgatttattttatcttcatctctccccatttcattgatttctcatttgtt 123
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 264 ttttctttgctgatttattttatctttgtctctccccatttcattgatttctcatttgtt 323
Query: 124 tttggagaaaggcaggtttagtttataatttatgattataccatgattccagtaggtttg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttggagaaaggcaggtttagtttataatttatgattataccatgattccagtaggtttg 383
Query: 184 tacatgtgtatctcaaaccaaacttctttctgtttaaggaggggcagtgaaccttacaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tacatgtgtatctcaaaccaaacttctttctgtttaaggaggggcagtgaaccttacaaa 443
Query: 244 agattataaggacaggtagaagaaagaagaaagaaaagaaaaaagaaagaaaaaattgtc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agattataaggacaggtagaagaaagaagaaagaaaagaaaaaagaaagaaaaaattgtc 503
Query: 304 tgcctgataaggaatgtaaatgtatttgtgtgattgactcatgaaatatgacttaaagca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgcctgataaggaatgtaaatgtatttgtgtgattgactcatgaaatatgacttaaagca 563
Query: 364 aacttaaaattttatgagaaaagaaatatgcttgcaaaacaatagatatttactatcagt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aacttaaaattttatgagaaaagaaatatgcttgcaaaacaatagatatttactatcagt 623
Query: 424 tttattctcatagattctt 442
|||||||||||||||||||
Sbjct: 624 tttattctcatagattctt 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_c19.g1 MSMg01no353_c19.g1 CHROMAT_FILE:
MSMg01no353_c19.g1 PHD_FILE: MSMg01no353_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:58 2005
(406 letters)
>mm_chr10_113347602_113348406
Length = 805
Score = 688 bits (356), Expect = 0.0
Identities = 368/372 (98%), Gaps = 1/372 (0%)
Strand = Plus / Minus
Query: 33 acacacacacacacacacacacacacacacacacacacacggttctaattaaccttaaaa 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 acacacacacacacacacacacacacacacacacacacacggttctaattaaccttaaaa 584
Query: 93 agatatgattagttttagccaccttttcaaacatccttagtatatgtatcccttctcctt 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 agatatgattagttttagccaccttttcaaacatccttagtatatgtatcccttctcctt 524
Query: 153 tcttctttttgtgtgttgccccccaatctcttttcctcagctaaggttttccattcattt 212
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tcttctttttgtgtgttg-accccaatctcttttcctcagctaaggttttccattcattt 465
Query: 213 cccccatttcctctttcacagcaactttttatcgctatcctctcttttatattcatgttc 272
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 464 cccccatttcctctttcacagcaactttttatcgctatcccctcttttatattcgtgttc 405
Query: 273 actgacacacaaaatactcactttctgattttcctagtatctgattttcctggtatctga 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 actgacacacaaaatactcactttctgattttcctagtatctgattttcctggtatctga 345
Query: 333 tgtatatggtcatctaaaaacatggggtggcatttattaataatagaagcaatgtggcat 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tgtatatggtcatctaaaaacatggggtggcatttattaataatagaagcaatgtggcat 285
Query: 393 ttgtctttctgg 404
||||||||||||
Sbjct: 284 ttgtctttctgg 273
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 805
Length adjustment: 9
Effective length of query: 397
Effective length of database: 796
Effective search space: 316012
Effective search space used: 316012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
