Query= MSMg01no353_k01.b1 MSMg01no353_k01.b1 CHROMAT_FILE:
MSMg01no353_k01.b1 PHD_FILE: MSMg01no353_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:33 2005
(458 letters)
>mm_chr10_111794573_111795432
Length = 860
Score = 468 bits (242), Expect = e-136
Identities = 264/272 (97%), Gaps = 4/272 (1%)
Strand = Plus / Plus
Query: 16 ggaattctttgcatttcc--cttccctttgtatgttagctgtgagagtggatatgctgaa 73
||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 216 ggaattctttgca-ttccaacttccctttgtatgtcagctgtgagagtggatatgctgaa 274
Query: 74 gagtatctaacgaacagcagccataaccactctaataccattttctccatcttgtggcag 133
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 275 gagtatctaacgaacagcagccataaccactctaataccattttccccatcttgtggcag 334
Query: 134 agccggagttctgtcatagatggcttattaaaatgctaatttagctttctcctggtactt 193
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 agccggagttctgtcacagatggcttattaaaatgctaatttagctttctcctggtactt 394
Query: 194 cttatggagtacacacgttttcctgatttacattagaactaggtcttctcagtgctattc 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cttatggagtacacacgttttcctgatttacattagaactaggtcttctcagtgctattc 454
Query: 254 tggttctgttggtagaattctgatg-acatta 284
|||||||||||||||||||||| || ||||||
Sbjct: 455 tggttctgttggtagaattctgctgtacatta 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 860
Length adjustment: 10
Effective length of query: 448
Effective length of database: 850
Effective search space: 380800
Effective search space used: 380800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_k01.g1 MSMg01no353_k01.g1 CHROMAT_FILE:
MSMg01no353_k01.g1 PHD_FILE: MSMg01no353_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:33 2005
(392 letters)
>mm_chr10_111962230_111963024
Length = 795
Score = 748 bits (387), Expect = 0.0
Identities = 392/395 (99%), Gaps = 3/395 (0%)
Strand = Plus / Minus
Query: 1 ccaaaatgacataaataaaagacagatattctgggtgtttataaataaatttcctatagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ccaaaatgacataaataaaagacagatattctgggtgtttataaataaatttcctatagt 536
Query: 61 agtattatatatgtaaatgaaaaagtaccaaataaacaatgactatgaatgaaaaaagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 agtattatatatgtaaatgaaaaagtaccaaataaacaatgactatgaatgaaaaaagat 476
Query: 121 tagacttcaaatatgacaattgaagtttattatttctttgccagtaatatctatatgcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tagacttcaaatatgacaattgaagtttattatttctttgccagtaatatctatatgcct 416
Query: 181 ttggttatatgtatgtgataatgcttttgtgtttattttttgtggctcaagtactgagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ttggttatatgtatgtgataatgcttttgtgtttattttttgtggctcaagtactgagat 356
Query: 241 tataacaacctactaccttttaactataactgaaatggtgagacattttaaagaaagttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tataacaacctactaccttttaactataactgaaatggtgagacattttaaagaaagttg 296
Query: 301 ttttcaaacagttaagcattcc---aaaaaaaaaaaaatgctctcgggtgtctgggatgt 357
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 295 ttttcaaacagttaagcattccaaaaaaaaaaaaaaaatgctctcgggtgtctgggatgt 236
Query: 358 agctcattgccaaaggcttttctactatgcaggag 392
|||||||||||||||||||||||||||||||||||
Sbjct: 235 agctcattgccaaaggcttttctactatgcaggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 795
Length adjustment: 9
Effective length of query: 383
Effective length of database: 786
Effective search space: 301038
Effective search space used: 301038
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
