Query= MSMg01no353_n15.b1 MSMg01no353_n15.b1 CHROMAT_FILE:
MSMg01no353_n15.b1 PHD_FILE: MSMg01no353_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:50 2005
(532 letters)
>mm_chr10_5500574_5501504
Length = 931
Score = 884 bits (457), Expect = 0.0
Identities = 509/529 (96%), Gaps = 5/529 (0%)
Strand = Plus / Minus
Query: 4 ggaattccagactttccacttcctcaggtatcttatgtgtttcccggtgcacgtctctga 63
||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 714 ggaattccagactggccacttcctcaggtatctgatgtgtttcccggtgcacatctctga 655
Query: 64 tggcttctttcctcattctctattagcagatggtccccatctctgctggtctaaaaaatg 123
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 654 tggcttctttcctcattctctattagcagatgatccccatctctgctggtctaaaaaatg 595
Query: 124 gttttctttgttcttccacaccttggaggtgttgttcttttcctgagtgattggaattga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 gttttctttgttcttccacaccttggaggtgttgttcttttcctgagtgattggaattga 535
Query: 184 tagtttgctgtctgttactaactatggaaagttctcggccacataactgacatgtttctt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tagtttgctgtctgttactaactatggaaagttctcggccacataactgacatgtttctt 475
Query: 244 gccctttctttgttgtcattcatttaaaccttactctttttattctgctggacttctaca 303
|| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |
Sbjct: 474 gctctttctttgttgtcattcattcaaaccttacactttttattctgctggacttctata 415
Query: 304 tttgctggtttggcacacagctgttgatttatcatccagcttactaatgtttcattggcc 363
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 414 tttgctggtttggcacacagctattgatttatcatccagcttactaatgtttcattggcc 355
Query: 364 acactgaagaactgaagacattctttatttttactacagtgtttggggcctgaggacata 423
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 354 acactgaagaactgaagacatcctttatttttactacagtgtttggggcctgaggacata 295
Query: 424 gtagacagtagatacctgattaacacttgtgaattctaggttccatctttgagtacaaaa 483
|||||||||||||| ||||||||| |||||||||||| |||||||||| |||||||||||
Sbjct: 294 gtagacagtagataactgattaacccttgtgaattctgggttccatctctgagtacaaaa 235
Query: 484 aagtactcatagcaaactttaaaaaaaattctttctaacatttgctttc 532
||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 234 aagtactcatagcaaactttaaaaaaa-----ttctaacatttgctttc 191
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 931
Length adjustment: 10
Effective length of query: 522
Effective length of database: 921
Effective search space: 480762
Effective search space used: 480762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_n15.g1 MSMg01no353_n15.g1 CHROMAT_FILE:
MSMg01no353_n15.g1 PHD_FILE: MSMg01no353_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:50 2005
(460 letters)
>mm_chr10_5319128_5319987
Length = 860
Score = 882 bits (456), Expect = 0.0
Identities = 459/460 (99%)
Strand = Plus / Plus
Query: 1 agcagttttcaaggatattactcagcacaccccagtatagccatacagagaacaactgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcagttttcaaggatattactcagcacaccccagtatagccatacagagaacaactgtt 260
Query: 61 aggtgctggcatttatctagtacttaatgtgttttgagcaccatgctaagaattgtgtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtgctggcatttatctagtacttaatgtgttttgagcaccatgctaagaattgtgtgt 320
Query: 121 gttacctcagttaacatccctgtgatatggctggctagatccctcaacttacagacaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttacctcagttaacatccctgtgatatggctggctagatccctcaacttacagacaaga 380
Query: 181 acaagagattagaaatatgaacacaggtctcacaagactctgaaccctactatactgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaagagattagaaatatgaacacaggtctcacaagactctgaaccctactatactgaaa 440
Query: 241 agacacctctctcccactgggatgtccatagtaggattaatcaagcaatgtatgcatagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agacacctctctcccactgggatgtccatagtaggattaatcaagcaatgtatgcatagg 500
Query: 301 accaggtgaactttccatttggaaggagggaataacagagccctcagttgcttcttgcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accaggtgaactttccatttggaaggagggaataacagagccctcagttgcttcttgcaa 560
Query: 361 cttgccttctcagcacacagctaggagctactgaatgtcaaagactatagatggacagct 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 561 cttgccttctcagcacacagctaggagctactgaatgtcaaacactatagatggacagct 620
Query: 421 agaaatttctgcatatggaatttatgtatcctgtctaaca 460
||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaaatttctgcatatggaatttatgtatcctgtctaaca 660
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
