Query= MSMg01no354_g18.b1 MSMg01no354_g18.b1 CHROMAT_FILE:
MSMg01no354_g18.b1 PHD_FILE: MSMg01no354_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:34 2005
(424 letters)
>mm_chr10_80917481_80918304
Length = 824
Score = 793 bits (410), Expect = 0.0
Identities = 419/422 (99%)
Strand = Plus / Plus
Query: 1 caagttccagctacagatctcatcgctcccctctaaacctgtgatccagagagggtgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagttccagctacagatctcatcgctcccctctaaacctgtgatccagagagggtgaga 260
Query: 61 cacagtgcaaggacacacagcagtgtgtgacccggaactgcatggaggttattcgagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacagtgcaaggacacacagcagtgtgtgacccggaactgcatggaggttattcgagaga 320
Query: 121 catggagagcaaccaaatggctcttgggcaactggatgcctaaggcatgaggtcgaggct 180
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 321 catggagagcaaccaaatggctcttgggcaactggatgcctaagacatgagatcgaggct 380
Query: 181 gccctctcatagccaagcccaccccccaacactcatcccagaagcttccagaagaattcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccctctcatagccaagcccaccccccaacactcatcccagaagcttccagaagaattcc 440
Query: 241 tagtttaggcaacatccacagacatgaaaacaatcccgccacctcccttcagccagtcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagtttaggcaacatccacagacatgaaaacaatcccgccacctcccttcagccagtcaa 500
Query: 301 cattgccccaagtgggtgcatttccaacctggacacagagacgcctgaggtcagatgggt 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 cattgccccaagtgggtgcatttccaccctggacacagagacgcctgaggtcagatgggt 560
Query: 361 cacacaactggaccctcagcttggggccctggggatttctggagcccccgagcgtgccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacacaactggaccctcagcttggggccctggggatttctggagcccccgagcgtgccca 620
Query: 421 gg 422
||
Sbjct: 621 gg 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no354_g18.g1 MSMg01no354_g18.g1 CHROMAT_FILE:
MSMg01no354_g18.g1 PHD_FILE: MSMg01no354_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:34 2005
(456 letters)
>mm_chr10_81119565_81120423
Length = 859
Score = 826 bits (427), Expect = 0.0
Identities = 450/459 (98%), Gaps = 3/459 (0%)
Strand = Plus / Minus
Query: 1 aaatccttttaatcttccaactcagcaaaatctttgtttcttcaaggatccacttctctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 aaatccttttaatcttccaactcagcaaaatctttgtttcttcaaggatccacttctctg 600
Query: 61 aggtaggaatttaatgacctagaac---cactcatttctccttagagcagtacctctctt 117
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 599 aggtaggaatttaatgacctagaacagagactcatttctccttagagcagtacctctctt 540
Query: 118 cccctggctccttcatttcctgtgcagctatctttttagaatacccaaataaaaaatatt 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 cccctggctccttcatttcctgtgcagctatctttttagaatacccaaataaaaaatatt 480
Query: 178 gaagttagacaccagctaaccaggataaaagatacaaccaccattttccttaaaataaaa 237
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 479 gaagttagacaccagctaaccaggataaaagatacaaccaccattttccttagaataaaa 420
Query: 238 tccaagtgcagctctgtctaggtcaagagcacaggcattaaatcaagcctgaaatgttct 297
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 419 tccaagtgcagctctgtctaggtcaagagcacaggcactaaatcaagcctgaaatgttct 360
Query: 298 ttgtccagatactacaattagagtggtggtctctttcttggccaccctaaacttctaata 357
||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ttgtccagacactacaattacagtggtggtctctttcttggccaccctaaacttctaata 300
Query: 358 tgaccacacagaaaacaacattaaggatgatttaacacctgcctcctgccacataggcta 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tgaccacacagaaaacaacattaaggatgatttaacacctgcctcctgccacataggcta 240
Query: 418 ctgcacaggagctgcaatctgcctaatccacctttgaat 456
||||||| |||||||||||||||||||||||||||||||
Sbjct: 239 ctgcacacgagctgcaatctgcctaatccacctttgaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 859
Length adjustment: 10
Effective length of query: 446
Effective length of database: 849
Effective search space: 378654
Effective search space used: 378654
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
