Query= MSMg01no355_f13.b1 MSMg01no355_f13.b1 CHROMAT_FILE:
MSMg01no355_f13.b1 PHD_FILE: MSMg01no355_f13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:46 2005
(596 letters)
>mm_chr10_19747663_19748658
Length = 996
Score = 990 bits (512), Expect = 0.0
Identities = 574/596 (96%), Gaps = 5/596 (0%)
Strand = Plus / Minus
Query: 4 ggaattctatggtgtcgtgcaccctgtgaccttgaatggagcaggatcaactactgtaaa 63
|||||||||||| || |||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 917 ggaattctatggagt-gtgcaccctgtgaccttgaatggagcaggatcaaatactataaa 859
Query: 64 taaggaaaaactcttgacattggttttaaatggcttttgtttcaaaagaac---aaaaaa 120
||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 858 taaggaaaaactcttgacattagttttcaatggcttttgtttcaaaagaacaaaaaaaaa 799
Query: 121 attaatgcatagataattctaaaactcaaatccacccaagagttgactggtttctccata 180
|||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 798 attaatgcatagataattct-aagctcaaatccacccaagagttgactggtttctccatg 740
Query: 181 tggctgagcatctgtggatatggtctcatgtagttcttatggtactggcctctaagagac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 739 tggctgagcatctgtggatatggtctcatgtagttcttatggtactggcctcgaagagac 680
Query: 241 ctggggcatgttagacaagcaccctaccactgagctatatgtcctatgagatatgtccat 300
|| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 679 ctcgggcatgttagacaagcaccctaccactgagctatacgtcctatgagatatgtccat 620
Query: 301 atttcttttttcactttgaattttgagacagcaactccctgagttatcaggactggcgtt 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 619 atttcttttttcactttggattttgagacagcaactccctgagttatcaggactggcctt 560
Query: 361 gaactccatgtagcttattattaagtagtaggtatggctggttctcagaatcatacttta 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 559 gaactccatgtagcttattattaagtagtaggtgtggctggttctcagaatcatacttta 500
Query: 421 catttctccaatgatgaaaatattatgctaagtgaaaagtaaagtcacaaaaggctgaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 catttctccaatgatgaaaatattatgctaagtgaaaagtaaagtcacaaaaggctgaca 440
Query: 481 atacttttgagaaatatttaaaatagaacaatcaatacagacagagcacagtgtttgcca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 atacttttgagaaatatttaaaatagaacaatcaatacagacagagcacagtgtttgcca 380
Query: 541 ggagtaagaggatgtgtgctgtggggaaagggtgactgctaatgggtagaaggttt 596
|||| | |||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 379 ggagcaggaggatatgtgctgtggggaaagggtgaatgctaatgggtagaaggttt 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_f13.g1 MSMg01no355_f13.g1 CHROMAT_FILE:
MSMg01no355_f13.g1 PHD_FILE: MSMg01no355_f13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:46 2005
(512 letters)
>mm_chr10_19583095_19584006
Length = 912
Score = 990 bits (512), Expect = 0.0
Identities = 512/512 (100%)
Strand = Plus / Plus
Query: 1 tacatcttatgcttgtgaggtaaatgtgccattttttaaattagaaagcttatactcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacatcttatgcttgtgaggtaaatgtgccattttttaaattagaaagcttatactcaaa 260
Query: 61 ttcaaagtttaaatctttttctaatgactaatagtccattaattatatagtagtgctttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcaaagtttaaatctttttctaatgactaatagtccattaattatatagtagtgctttc 320
Query: 121 tagagagaccacatatctttcaaatgtaactagtggaattacatcatgagaaaacagtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagagagaccacatatctttcaaatgtaactagtggaattacatcatgagaaaacagtta 380
Query: 181 atgtttattagatatgtagagatgataaactgaaatgaataatgcccatgttcccaaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtttattagatatgtagagatgataaactgaaatgaataatgcccatgttcccaaaga 440
Query: 241 aagaactgtggaagcaatgtgtagagaaacacacacagatctgcacttggcttacactct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagaactgtggaagcaatgtgtagagaaacacacacagatctgcacttggcttacactct 500
Query: 301 gtgaactaagagtcagtgagcatgcaaaagatcaggactaatgctacagagaacaaggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgaactaagagtcagtgagcatgcaaaagatcaggactaatgctacagagaacaaggag 560
Query: 361 ttctaaagataaattaatatataaagagaattccagttatataagcggtcatattacagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctaaagataaattaatatataaagagaattccagttatataagcggtcatattacagg 620
Query: 421 ccaagtaccacagacctcacaacagaataagggctccccattcagacataataaggataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccaagtaccacagacctcacaacagaataagggctccccattcagacataataaggataa 680
Query: 481 aggaagaaagaaaacgcaaggactgtatgaat 512
||||||||||||||||||||||||||||||||
Sbjct: 681 aggaagaaagaaaacgcaaggactgtatgaat 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
