Query= MSMg01no355_i08.b1 MSMg01no355_i08.b1 CHROMAT_FILE:
MSMg01no355_i08.b1 PHD_FILE: MSMg01no355_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:59 2005
(511 letters)
>mm_chr10_82837829_82838739
Length = 911
Score = 897 bits (464), Expect = 0.0
Identities = 495/506 (97%), Gaps = 2/506 (0%)
Strand = Plus / Minus
Query: 5 gaattctatcccatttgcctcctgttaaaccttctgtgtttgtattc--ctgttttgtga 62
||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 879 gaattctatcccaggtggctcctgttaaaccttctgtgtttgtattcctctgttttgtga 820
Query: 63 aagaatccagtaaacctctttgtaccttgctggtgtgtcacccaacttccctattttctt 122
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 aagaatccagtaaaactctttgtaccttgctggtgtgtcacccaacttccctattttctt 760
Query: 123 cggtataaaaagtttgatgctcgatttgacaaattacattcagattctacacaacctctc 182
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 ctgtataaaaagtttgatgctcgatttgacaaattacattcagattctacacaacctctc 700
Query: 183 ctgtgtacaactgtcatctcatccaatgctttgcccacctgctactagagacccgttcca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ctgtgtacaactgtcatctcatccaatgctttgcccacctgctactagagacccgttcca 640
Query: 243 cacagacaaaggggcccagagggtctgcagcagtcaatgatagataagaacctgtgcaga 302
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 639 cgcagacaaaggggcccagagggtctgcggcagtcaatgatagataagaacctgtgcaga 580
Query: 303 ttaacctaagacgggcacagcccataatactgagaatctcctgaggtggggccaacaagg 362
||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 579 ttaacctaagatgggcacagcccataatactgagaatctcctgaggtggggcaaacaagg 520
Query: 363 tcagagcagagaagtctgactcctactggataaaaaacagaaaggggagctggggattta 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tcagagcagagaagtctgactcctactggataaaaaacagaaaggggagctggggattta 460
Query: 423 gctcagtggtagagcgcttgcctagcaagtgcaaggccctgggttcagtcctcagctctg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gctcagtggtagagcgcttgcctagcaagtgcaaggccctgggttcagtcctcagctctg 400
Query: 483 aggaataaaaacaaaaacaaaaaaaa 508
||||||||||||||||||||||||||
Sbjct: 399 aggaataaaaacaaaaacaaaaaaaa 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_i08.g1 MSMg01no355_i08.g1 CHROMAT_FILE:
MSMg01no355_i08.g1 PHD_FILE: MSMg01no355_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:00 2005
(336 letters)
>mm_chr10_82654435_82655168
Length = 734
Score = 623 bits (322), Expect = 0.0
Identities = 332/336 (98%), Gaps = 2/336 (0%)
Strand = Plus / Plus
Query: 1 tatggagactgggttattttgtaagttaatatgtcttcgggggagatgctgcgagcggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatggagactgggttattttgtaagttaatatgtcttcgggggagatgctgcgagcggca 260
Query: 61 tggttaagaattatttaaaaattctccacggggaaggacagctgtctttgcaggggagcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggttaagaattatttaaaaattctccacggggaaggacagctgtctttgcaggggagcg 320
Query: 121 gggtggaatatccctgtttttagaagtggatactgcaacactgtctccaaggtgtccttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggtggaatatccctgtttttagaagtggatactgcaacactgtctccaaggtgtccttg 380
Query: 181 tgttctggtgaagtccacaaactgtgcattccataaagtctaatgaatcttatttatagt 240
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttctggtgaagtccacaaactg--cattccataaagtctaatgaatcttatttatagt 438
Query: 241 tatttaaacttgttctgtggcagcagcctgctcctgtctgtgcagaggagagtacagtct 300
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tatttaaacgtggtctgtggcagcagcctgctcctgtctgtgcagaggagagtacagtct 498
Query: 301 gtgcttcgctggctatggctcattgggggaggggag 336
||||||||||||||||||||||||||||||||||||
Sbjct: 499 gtgcttcgctggctatggctcattgggggaggggag 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 734
Length adjustment: 9
Effective length of query: 327
Effective length of database: 725
Effective search space: 237075
Effective search space used: 237075
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
