MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-356N01
Chromosome	10 (Build37)
Map Location	116,434,374 - 116,631,957
singlet/doublet	doublet
Overlap gene	Best3, Lrrc10, Cct2, Frs2
Upstream gene	Ptprr, 4933416C03Rik, Ptprb, Kcnmb4, Cnot2, LOC668080, EG668091, Gm239, Rab3ip, D630029K05Rik, LOC544741
Downstream gene	Yeats4, 9530003J23Rik, Lyzs, Lyz, Cpsf6, LOC668146, LOC668149, Kifc5c, Cpm, Mdm2, Slc35e3, Nup107, Rap1b, Mdm1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ptprr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19279 MGI:109559
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933416C03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619332 MGI:3588269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Ptprb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19263 MGI:97809
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcnmb4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58802 MGI:1913272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cnot2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72068 MGI:1919318
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	LOC668080 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668080
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 588 ESTs, 5 Proteins pseudo : _no_value

name	EG668091 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668091 MGI:3648535
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Gm239 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237558 MGI:2685085
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab3ip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216363 MGI:105933
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D630029K05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:103175 MGI:2143561
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs

name	LOC544741 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:544741
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 280 ESTs, 6 Proteins pseudo : _no_value

name	Best3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382427 MGI:3580298
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrrc10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237560 MGI:2448063
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cct2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12461 MGI:107186
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Frs2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:327826 MGI:1100860
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Yeats4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64050 MGI:1927224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9530003J23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77397 MGI:1924647
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lyzs (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17105 MGI:96897
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lyz (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17110 MGI:96902
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cpsf6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432508 MGI:1913948
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668146 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668146
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC668149 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668149
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Kifc5c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94118 MGI:2137415
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins

name	Cpm (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70574 MGI:1917824
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 121 ESTs, 20 Proteins

name	Mdm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17246 MGI:96952
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc35e3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215436 MGI:2448489
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nup107 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:103468 MGI:2143854
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rap1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215449 MGI:894315
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mdm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17245 MGI:96951
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ptprr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755247 GeneID:19279 MGI:109559
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase, receptor type, R transcript_id : NM_011217.1

name	Ptprb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23618913 GeneID:19263 MGI:97809
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase, receptor type, B transcript_id : NM_029928.1

name	Kcnmb4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946833 GeneID:58802 MGI:1913272
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium large conductance calcium-activated channel, subfamily M, beta member 4 transcript_id : NM_021452.1

name	Cnot2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801769 GeneID:72068 MGI:1919318
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CCR4-NOT transcription complex, subunit 2 transcript_id : NM_001037846.2

name	Cnot2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21312479 GeneID:72068 MGI:1919318
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CCR4-NOT transcription complex, subunit 2 transcript_id : NM_028082.1

name	Cnot2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83745113 GeneID:72068 MGI:1919318
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CCR4-NOT transcription complex, subunit 2 transcript_id : NM_001037847.1

name	Cnot2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922714 GeneID:72068 MGI:1919318
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CCR4-NOT transcription complex, subunit 2 transcript_id : NM_001037848.2

name	EG668091 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388673 GeneID:668091 MGI:3648535
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : predicted gene, EG668091 transcript_id : XM_994255.1

name	Gm239 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374921 GeneID:237558 MGI:2685085
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 239, (NCBI) transcript_id : NM_001033333.2

name	Rab3ip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117676376 GeneID:216363 MGI:105933
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB3A interacting protein transcript_id : NM_001003950.2

name	Best3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56090232 GeneID:382427 MGI:3580298
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bestrophin 3 transcript_id : NM_001007583.1

name	Lrrc10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930741 GeneID:237560 MGI:2448063
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat containing 10 transcript_id : NM_146242.2

name	Cct2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126521834 GeneID:12461 MGI:107186
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chaperonin subunit 2 (beta) transcript_id : NM_007636.2

name	Frs2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560836 GeneID:327826 MGI:1100860
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibroblast growth factor receptor substrate 2 transcript_id : NM_177798.3

name	Yeats4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803429 GeneID:64050 MGI:1927224
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : YEATS domain containing 4 transcript_id : NM_026570.2

name	9530003J23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352889 GeneID:77397 MGI:1924647
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9530003J23 gene transcript_id : NM_029906.2

name	Lyzs (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560450 GeneID:17105 MGI:96897
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lysozyme transcript_id : NM_017372.2

name	Lyz (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378997 GeneID:17110 MGI:96902
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lysozyme transcript_id : NM_013590.3

name	Cpsf6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62909982 GeneID:432508 MGI:1913948
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cleavage and polyadenylation specific factor 6 transcript_id : NM_001013391.1

name	Kifc5c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388677 GeneID:94118 MGI:2137415
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins product : kinesin family member C5C transcript_id : XM_137270.7

name	Cpm (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388683 GeneID:70574 MGI:1917824
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 121 ESTs, 20 Proteins product : carboxypeptidase M transcript_id : XM_994613.1

name	Mdm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801983 GeneID:17246 MGI:96952
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transformed mouse 3T3 cell double minute 2 transcript_id : NM_010786.3

name	Slc35e3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37497123 GeneID:215436 MGI:2448489
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 35, member E3 transcript_id : NM_029875.2

name	Nup107 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371216 GeneID:103468 MGI:2143854
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleoporin 107 transcript_id : NM_134010.2

name	Rap1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117676385 GeneID:215449 MGI:894315
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAS related protein 1b transcript_id : NM_024457.2

name	Mdm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27229284 GeneID:17245 MGI:96951
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transformed mouse 3T3 cell double minute 1 transcript_id : NM_148922.2

name	Mdm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754669 GeneID:17245 MGI:96951
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transformed mouse 3T3 cell double minute 1 transcript_id : NM_010785.1

name	Ptprr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755248 CCDS:CCDS24182.1 GeneID:19279 MGI:109559
definition	EC_number : 3.1.3.48 GO_component : GO:0009986 - cell surface [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0019901 - protein kinase binding [Evidence IDA]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005001 - transmembrane receptor protein tyrosine phosphatase activity [Evidence ISS] GO_process : GO:0001701 - embryonic development (sensu Mammalia) [Evidence ISS]; GO:0006470 - protein amino acid dephosphorylation [Evidence IEA] [Evidence ISS]; GO:0007185 - transmembrane receptor protein tyrosine phosphatase signaling pathway [Evidence IEA] codon_start : 1 note : STEP-like PTPase; protein-tyrosine-phosphatase-SL product : protein tyrosine phosphatase, receptor type, R protein_id : NP_035347.1

name	Ptprb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23618914 GeneID:19263 MGI:97809
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006470 - protein amino acid dephosphorylation [Evidence IEA]; GO:0007185 - transmembrane receptor protein tyrosine phosphatase signaling pathway [Evidence IEA] codon_start : 1 exception : mismatches in translation note : vascular endothelial protein tyrosine phosphatase product : protein tyrosine phosphatase, receptor type, B protein_id : NP_084204.1

name	Kcnmb4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946834 CCDS:CCDS24184.1 GeneID:58802 MGI:1913272
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0008076 - voltage-gated potassium channel complex [Evidence ISS] GO_function : GO:0015269 - calcium-activated potassium channel activity [Evidence IEA] [Evidence ISS]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0005513 - detection of calcium ion [Evidence ISS]; GO:0019228 - generation of action potential [Evidence ISS]; GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA] [Evidence ISS]; GO:0001508 - regulation of action potential [Evidence ISS]; GO:0046928 - regulation of neurotransmitter secretion [Evidence ISS]; GO:0019229 - regulation of vasoconstriction [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : large conductance calcium-dependent potassium ion channel beta 4 subunit; Slowpoke beta 4 product : calcium activated potassium channel beta 4 subunit protein_id : NP_067427.1

name	Cnot2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83745108 GeneID:72068 MGI:1919318
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform a is encoded by transcript variant 1 product : CCR4-NOT transcription complex, subunit 2 isoform a protein_id : NP_001032935.1

name	Cnot2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83745114 GeneID:72068 MGI:1919318
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 2 product : CCR4-NOT transcription complex, subunit 2 isoform a protein_id : NP_001032936.1

name	Cnot2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312480 CCDS:CCDS24185.1 GeneID:72068 MGI:1919318
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 3 product : CCR4-NOT transcription complex, subunit 2 isoform b protein_id : NP_082358.1

name	Cnot2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83745118 GeneID:72068 MGI:1919318
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform c is encoded by transcript variant 4 product : CCR4-NOT transcription complex, subunit 2 isoform c protein_id : NP_001032937.1

name	EG668091 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94388674 GeneID:668091 MGI:3648535
definition	codon_start : 1 product : hypothetical protein protein_id : XP_999349.1

name	Gm239 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701830 GeneID:237558 MGI:2685085
definition	codon_start : 1 product : hypothetical protein LOC237558 protein_id : NP_001028505.1

name	Rab3ip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51556219 CCDS:CCDS24186.1 GeneID:216363 MGI:105933
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005829 - cytosol [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : gene trap PAT 12; SSX2 interacting protein product : RAB3A interacting protein protein_id : NP_001003950.1

name	Best3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56090233 CCDS:CCDS24188.1 GeneID:382427 MGI:3580298
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005254 - chloride channel activity [Evidence IDA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence IEA] GO_process : GO:0015698 - inorganic anion transport [Evidence IDA]; GO:0006811 - ion transport [Evidence IEA]; GO:0043271 - negative regulation of ion transport [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : vitelliform macular dystrophy 2-like protein 3 product : vitelliform macular dystrophy 2-like 3 protein_id : NP_001007584.1

name	Lrrc10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122819 CCDS:CCDS24189.1 GeneID:237560 MGI:2448063
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : leucine-rich repeat protein; leucine-rich containing 10; leucine-rich repeat-containing 10 product : leucine rich repeat containing 10 protein_id : NP_666354.1

name	Cct2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126521835 GeneID:12461 MGI:107186
definition	GO_component : GO:0005832 - chaperonin-containing T-complex [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0044267 - cellular protein metabolism [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA] codon_start : 1 product : chaperonin subunit 2 (beta) protein_id : NP_031662.2

name	Frs2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244340 CCDS:CCDS24190.1 GeneID:327826 MGI:1100860
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005158 - insulin receptor binding [Evidence IEA]; GO:0019211 - phosphatase activator activity [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016299 - regulator of G-protein signaling activity [Evidence ISS]; GO:0005068 - transmembrane receptor protein tyrosine kinase adaptor protein activity [Evidence ISS]; GO:0005069 - transmembrane receptor protein tyrosine kinase docking protein activity [Evidence IDA] GO_process : GO:0000187 - activation of MAPK activity [Evidence IMP]; GO:0008595 - determination of anterior/posterior axis, embryo [Evidence IMP]; GO:0008543 - fibroblast growth factor receptor signaling pathway [Evidence ISS] [Evidence IGI]; GO:0030900 - forebrain development [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS]; GO:0010003 - gastrulation (sensu Mammalia) [Evidence IMP]; GO:0001759 - induction of an organ [Evidence IMP]; GO:0043350 - neuroblast proliferation (sensu Vertebrata) [Evidence IMP] [Evidence IGI]; GO:0046619 - optic placode formation (sensu Mammalia) [Evidence IMP]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IDA]; GO:0007185 - transmembrane receptor protein tyrosine phosphatase signaling pathway [Evidence ISS] codon_start : 1 product : fibroblast growth factor receptor substrate 2 protein_id : NP_808466.1

name	Yeats4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386064 CCDS:CCDS24191.1 GeneID:64050 MGI:1927224
definition	GO_component : GO:0005654 - nucleoplasm [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0001558 - regulation of cell growth [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : glioma-amplified sequence-41 product : YEATS domain containing 4 protein_id : NP_080846.1

name	9530003J23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21539649 CCDS:CCDS24192.1 GeneID:77397 MGI:1924647
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0003796 - lysozyme activity [Evidence IEA] GO_process : GO:0016998 - cell wall catabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC77397 protein_id : NP_084182.1

name	Lyzs (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8393739 GeneID:17105 MGI:96897
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]; GO:0003796 - lysozyme activity [Evidence IEA] GO_process : GO:0019835 - cytolysis [Evidence IEA]; GO:0042742 - defense response to bacterium [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0051707 - response to other organism [Evidence IEA] codon_start : 1 product : lysozyme protein_id : NP_059068.1

name	Lyz (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305247 GeneID:17110 MGI:96902
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]; GO:0003796 - lysozyme activity [Evidence IEA] GO_process : GO:0019835 - cytolysis [Evidence IEA]; GO:0042742 - defense response to bacterium [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0051707 - response to other organism [Evidence IEA] codon_start : 1 note : renal amyloidosis product : P lysozyme structural protein_id : NP_038618.1

name	Cpsf6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62909983 CCDS:CCDS24193.1 GeneID:432508 MGI:1913948
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA] codon_start : 1 product : cleavage and polyadenylation specific factor 6 protein_id : NP_001013409.1

name	Kifc5c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94388678 GeneID:94118 MGI:2137415
definition	codon_start : 1 exception : unclassified translation discrepancy note : overriding stop codons product : similar to Kifc1 protein protein_id : XP_137270.7 transl_except : (pos:117031431..117031433,aa:OTHER) transl_except : (pos:117031461..117031463,aa:OTHER) transl_except : (pos:117031593..117031595,aa:OTHER) transl_except : (pos:117031656..117031658,aa:OTHER) transl_except : (pos:117031662..117031664,aa:OTHER) transl_except : (pos:117032202..117032204,aa:OTHER) transl_except : (pos:117032682..117032684,aa:OTHER) transl_except : (pos:117032781..117032783,aa:OTHER) transl_except : (pos:117032952..117032954,aa:OTHER)

name	Cpm (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94388684 GeneID:70574 MGI:1917824
definition	codon_start : 1 product : carboxypeptidase M protein_id : XP_999707.1

name	Mdm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754672 CCDS:CCDS24194.1 GeneID:17246 MGI:96952
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005730 - nucleolus [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030163 - protein catabolism [Evidence IDA]; GO:0016567 - protein ubiquitination [Evidence IDA]; GO:0007089 - traversing start control point of mitotic cell cycle [Evidence IDA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : transformed mouse 3T3 cell double minute 2 protein_id : NP_034916.1

name	Slc35e3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37497124 CCDS:CCDS24195.1 GeneID:215436 MGI:2448489
definition	codon_start : 1 product : solute carrier family 35, member E3 protein_id : NP_084151.2

name	Nup107 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789351 GeneID:103468 MGI:2143854
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005643 - nuclear pore [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0015288 - porin activity [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : nucleoporin 107 protein_id : NP_598771.1

name	Rap1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859753 CCDS:CCDS24196.1 GeneID:215449 MGI:894315
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008283 - cell proliferation [Evidence IPI]; GO:0006306 - DNA methylation [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IDA] [Evidence IEA] codon_start : 1 product : RAS related protein 1b protein_id : NP_077777.1

name	Mdm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22507389 GeneID:17245 MGI:96951
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2 product : transformed mouse 3T3 cell double minute 1 isoform 2 protein_id : NP_683724.1

name	Mdm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754670 GeneID:17245 MGI:96951
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : transformed mouse 3T3 cell double minute 1 isoform 1 protein_id : NP_034915.1

name	LOC668146 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668146
definition	number : 1 pseudo : _no_value

name	LOC668149 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668149
definition	number : 3 pseudo : _no_value

name	LOC668149 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668149
definition	number : 2 pseudo : _no_value

name	LOC668149 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668149
definition	number : 1 pseudo : _no_value

name	4933416C03Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149260888 GeneID:619332 MGI:3588269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933416C03 gene pseudo : _no_value transcript_id : XR_035083.1

name	LOC668080 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261187 GeneID:668080
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 588 ESTs, 5 Proteins product : similar to ribosomal protein pseudo : _no_value transcript_id : XR_034799.1

name	D630029K05Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149261188 GeneID:103175 MGI:2143561
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs product : RIKEN cDNA D630029K05 gene transcript_id : XR_035451.1

name	LOC544741 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261066 GeneID:544741
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 280 ESTs, 6 Proteins product : similar to ribosomal protein S15 pseudo : _no_value transcript_id : XR_033859.1

clone name	MSMg01-383H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465M24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-075A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490C16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-110M13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-318C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067E21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-536F23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-436K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526H10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-367P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179B24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-201J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465A21
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-022I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305L21
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-356N01.T7 (MSMg01no356_n01.b1)	MSMg01-356N01.TJ (MSMg01no356_n01.g1)
ACC	AG466867	AG466868
length	770	739
length of high quality (start - end)	241 (44 - 284)	244 (72 - 315)
definition	CHROMAT_FILE: MSMg01no356_n01.b1 PHD_FILE: MSMg01no356_n01.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:50:39 2005	CHROMAT_FILE: MSMg01no356_n01.g1 PHD_FILE: MSMg01no356_n01.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:50:39 2005
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(116,434,374 - 116,434,606)	(116,631,715 - 116,631,957)
sequence	TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA TTCCTTTGTTTTTAAATGAAACAGTAGAGTTTTTATTATTCTGAGGAGTA GAAAGACCCCACCGCATGGTACCAGGAAGATATATCTGATTTGTTATCAC AGGTTAAAGTTCTCAAATTAATAATAAAAAGCTTGTATTTCTGCTTACGC TAGAATTGAACTAAAAGTCAGTCAGTTGTGTTACAAAGCCCCTGAAGTGG GGGGAGGGGGGAGGGCGCANTTATTTATCATGAAAACTGCNACAGAGGCT CTGCTACTTTGCCTGTGGACTCTGAAGTTGCTCTGGAAAGTTCTAGCCAT TCCAATCACCTGCCCTGGAAAATGTCACTCGTCCTAAGCTAATTCCATAA GCGTGGATCTTGGCTAACTCCGGGCATGACCTTAATCAAGTTTTGACACT TTATAAGTCGCGCTGAATCCTAATCTTCTCCCCAGACCTCCCGATCTTCA TGTAACCTTTCTTGCTCTTTGCCCTGATACTTATTCCTATCATTTATACC TAGTTTGTCCTCTTGCTTGCATCCTTTATTCCACTCTTAATTGATGTCTC GTTATCCCTTTCTCTTTTCCCATCTTTTGGCAACCGCTAATCTACGTATG CTGGTCTCATCTTTTATCACTGGGGTGCCCCTCCTACTCTCACATTTTTT TACTGTCCCGGTCGTTGACCGTTACTATTTTCGCTTTCCCCCGCCTCACC CCATATCCCGCTCCTCACTA	TTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXCAACACAAGGCTGGGTCTTGGCTTTGTTT CCATCTCTGGTCCATGTCTTTATTATCTGCTCTTTCTGACCTAGAATTGT GACCTTTCCCTCTTAGTAAAACATTAGCATAGACTCTTGCCCCAGCCTTT TTTAAAAGAGCAAGACAAAGAACATCTAATGTGATCAACATGTGTGTGTG TGTGTGTGTGTCTGTGTGTGTGTGTGTGTCCCAGAGTGTGCACCCATGCC ATGGTAAGTGTGCAGAGGTTATAGAACAGCTTTGTAGAGTCAAGTCTTTC CTTTTTCTTTAGGGATTGACCGCAGATTTTACGGCTTGCGCGGCAAGGCT GTCGAGCAGCCTCATGAACCGTCAGAGCATTTAAAGGATACCTCTGTAGA TGTTTCTCCAGTCTCAACTGGAGGGATGTAAGTTTGAGCCCAGGCTGAGC TACTGTTTACTATCCATCCTACCCACCAGCATTTATTAAAACGTACCTGT ACCTTTCAGGTAGCTGGATCATGCCAAACTGGAATCAATTCTTTTCATGT TCTCTGTTGACGTCTACTTTGACCAATGTGACGCTTATTCTCCTTGGTGG GTACCTACTTGTCCTTTTTATATCCCCCTGGGCTTTCCCTGTGTGAATTT GTTTCTTATAACCACCCCTTGTTCACCTTTTACGTTTCN
quality values	Open. Hide. 6 6 6 6 9 15 32 41 37 33 32 30 25 15 19 9 9 9 19 22 41 48 59 30 30 30 25 15 15 10 8 8 8 8 9 12 25 39 37 37 33 33 33 36 59 57 57 38 38 38 42 50 50 57 57 57 57 57 57 43 40 28 28 23 20 31 43 48 50 42 42 42 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 47 50 57 57 57 57 57 59 59 57 57 57 50 50 50 68 48 48 50 50 50 50 51 50 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 59 59 68 68 68 68 68 57 57 57 57 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 68 68 68 68 68 59 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 54 57 59 54 54 59 59 59 68 68 68 68 59 57 57 57 57 57 57 59 54 54 57 57 57 57 48 53 53 57 57 57 59 57 50 53 50 53 50 53 53 50 50 41 41 40 41 41 23 25 3 0 3 23 27 37 37 37 37 25 24 14 14 12 17 9 9 9 9 14 27 3 0 3 23 20 31 32 43 37 59 35 39 39 59 59 59 59 59 59 59 37 35 35 36 37 37 43 35 35 24 28 15 22 22 24 18 18 27 28 43 43 43 48 48 57 48 42 39 27 27 17 18 18 28 24 22 19 19 20 38 36 40 37 28 25 25 26 28 30 30 30 39 44 44 33 30 24 15 15 17 21 21 15 12 12 12 15 18 19 21 18 18 23 32 28 28 28 13 13 13 20 27 12 12 11 17 17 18 15 22 8 8 6 6 8 15 19 28 24 24 21 21 11 15 15 21 21 24 28 32 32 28 26 17 12 11 11 15 23 32 39 37 26 21 15 9 10 10 13 13 16 19 10 10 6 6 8 6 8 12 12 17 21 15 20 13 16 15 9 10 8 8 8 8 8 13 13 13 12 8 6 6 8 8 10 19 17 13 10 11 12 15 11 11 11 11 11 11 11 10 10 11 10 10 11 11 11 13 13 11 11 11 11 11 11 10 10 10 8 8 10 8 10 10 10 10 10 11 8 8 11 12 12 14 12 13 8 8 6 6 8 8 9 11 9 9 9 9 9 9 9 9 10 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 6 7 6 7 8 6 6 8 8 8 8 8 8 6 6 6 6 8 8 8 8 8 8 10 8 10 8 8 8 8 8 10 10 8 9 10 9 6 6 7 7 10 12 10 10 8 8 8 8 8 8 17 17 19 22 18 15 9 8 8 8 8 8 10 10 8 6 6 8 8 8 9 9 10 15 15 10 8 8 8 8 8 8 8 10 8 8 8 10 10 9 8 8 10 8 8 8 8 8 10 12 12 8 8 8 9 11 11 10 8 8 6 8 6 7 8 15 11 9 6 10 8 8 8 12 12 10 10 8 8 8 8 8 12 17 23 15 11 9 9 9 9 9 10 6 6 6 8 8 8 8 8 6 7 8 10 10 12 10 10 9 9 10 6 7 8 8 9 9 10 10 10 10 10 17 21 14 13 11 8 8 8 8 10 8 8 8 8 9 9 10 10 8 13 13 9 10 11 11 13 10 11 10 9 9 9 9	Open. Hide. 7 7 8 8 8 8 15 17 15 10 11 12 24 31 39 39 37 37 37 39 50 50 47 59 34 25 23 9 9 9 9 9 9 10 10 10 10 10 20 18 32 23 32 36 37 44 41 47 47 44 44 50 50 47 33 23 12 9 9 11 11 11 11 11 18 13 18 24 22 22 16 17 10 26 23 50 50 50 38 42 59 59 59 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 50 51 50 50 50 51 68 68 68 68 59 50 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 68 57 57 50 50 50 51 50 50 68 57 57 68 68 57 57 59 59 59 59 59 68 68 68 59 57 68 68 68 57 57 59 52 52 57 59 59 59 57 59 59 59 59 59 59 57 57 59 59 59 59 57 57 59 59 59 68 68 68 68 68 68 59 57 57 54 54 54 57 57 68 68 68 68 68 68 68 68 57 68 68 68 68 68 59 68 68 68 68 68 68 68 68 68 68 57 57 57 68 68 68 68 68 68 59 59 59 59 59 59 59 68 59 59 59 59 59 57 59 57 59 59 59 68 68 68 68 68 68 68 68 59 59 54 54 54 59 59 54 59 59 68 68 59 59 57 59 59 59 48 48 48 57 57 48 48 48 47 43 39 39 39 39 47 59 59 47 34 30 19 12 12 15 15 12 12 12 12 12 12 22 30 34 40 40 48 48 50 53 57 57 43 39 37 35 35 39 43 57 57 57 57 57 57 57 57 57 57 59 59 59 54 54 54 43 43 44 30 30 36 36 43 43 43 43 44 44 30 32 28 30 44 44 57 57 57 57 46 44 43 43 59 47 43 39 33 31 31 28 42 42 42 42 37 37 42 42 43 42 42 35 43 32 19 10 10 10 13 16 36 36 42 32 32 15 15 14 14 14 32 32 43 37 37 37 42 40 38 20 20 22 36 44 37 37 37 44 44 37 31 31 28 34 37 36 36 37 32 43 46 46 59 43 40 33 28 25 25 21 21 19 17 17 24 23 20 19 15 14 14 14 21 30 34 35 22 19 10 10 10 17 18 31 23 15 9 11 10 10 9 9 9 13 10 11 11 16 11 11 11 13 10 18 16 22 10 10 10 8 8 8 8 8 9 10 9 11 11 10 10 10 10 10 10 10 10 13 13 27 16 14 11 11 12 17 15 10 9 9 9 9 8 10 10 8 8 8 10 15 15 11 10 9 10 10 9 9 9 10 12 13 10 10 10 13 13 18 21 13 13 11 6 6 6 6 8 6 8 8 8 8 8 9 10 10 16 10 9 8 8 8 8 8 8 8 9 9 9 10 10 10 11 15 9 9 9 9 9 9 11 11 9 8 8 8 10 8 11 11 11 10 8 8 8 7 8 7 9 9 11 11 11 10 14 8 8 8 8 8 8 8 8 10 8 9 10 10 10 8 8 8 6 6 8 8 6 6 6 6 8 8 15 12 10 6 6 8 10 10 9 10 10 14 15 18 12 11 11 11 14 14 11 10 10 10 10 10 10 8 8 6 6 8 8 8 10 10 8 12 8 10 11 11 10 8 8 8 8 8 8 8 8 8 11 9 9 12 15 10 10 8 8 6 6 10 6 8 8 8 8 8 8 9 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no356_n01.b1 MSMg01no356_n01.b1 CHROMAT_FILE:
MSMg01no356_n01.b1 PHD_FILE: MSMg01no356_n01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:39 2005
         (241 letters)



>mm_chr10_116434170_116434810
          Length = 641

 Score =  429 bits (222), Expect = e-125
 Identities = 230/233 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctttgtttttaaatgaaacagtagagtttttattattctgaggagtagaaagac 64
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctttatttttaaatgaaacagtagagtttttattattctgaggagtagaaagac 264

                                                                       
Query: 65  cccaccgcatggtaccaggaagatatatctgatttgttatcacaggttaaagttctcaaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cccaccgcatggtaccaggaagatatatctgatttgttatcacaggttaaagttctcaaa 324

                                                                       
Query: 125 ttaataataaaaagcttgtatttctgcttacgctagaattgaactaaaagtcagtcagtt 184
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 325 ttaataataaaaagcttgtatttctgcttacgctagaattgaactagaagtcagtcagtt 384

                                                                
Query: 185 gtgttacaaagcccctgaagtggggggaggggggagggcgcanttatttatca 237
           |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 385 gtgttacaaagcccctgaagtggggggaggggggagggcgcagttatttatca 437


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space:   146624
Effective search space used:   146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no356_n01.g1 MSMg01no356_n01.g1 CHROMAT_FILE:
MSMg01no356_n01.g1 PHD_FILE: MSMg01no356_n01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:39 2005
         (244 letters)



>mm_chr10_116631589_116632232
          Length = 644

 Score =  455 bits (235), Expect = e-132
 Identities = 241/243 (99%)
 Strand = Plus / Minus

                                                                       
Query: 2   aacacaaggctgggtcttggctttgtttccatctctggtccatgtctttattatctgctc 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aacacaaggctgggtcttggctttgtttccatctctggtccatgtctttattatctgctc 310

                                                                       
Query: 62  tttctgacctagaattgtgacctttccctcttagtaaaacattagcatagactcttgccc 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tttctgacctagaattgtgacctttccctcttagtaaaacattagcatagactcttgccc 250

                                                                       
Query: 122 cagccttttttaaaagagcaagacaaagaacatctaatgtgatcaacatgtgtgtgtgtg 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 cagccttttttaaaagagcaagacaaagaacatctaatgtgatcaacatgtgtgtgtgtg 190

                                                                       
Query: 182 tgtgtgtgtctgtgtgtgtgtgtgtgtcccagagtgtgcacccatgccatggtaagtgtg 241
           ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tgtgtgtgtgtctgtgtgtgtgtgtgtcccagagtgtgcacccatgccatggtaagtgtg 130

              
Query: 242 cag 244
           |||
Sbjct: 129 cag 127


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space:   149225
Effective search space used:   149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information