Query= MSMg01no356_p20.b1 MSMg01no356_p20.b1 CHROMAT_FILE:
MSMg01no356_p20.b1 PHD_FILE: MSMg01no356_p20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:52 2005
(298 letters)
>mm_chr10_123352799_123353495
Length = 697
Score = 478 bits (247), Expect = e-139
Identities = 281/301 (93%), Gaps = 19/301 (6%)
Strand = Plus / Minus
Query: 5 gaattctttatccga-tcacatcaattactttatcaatagattccctaagatattaaggg 63
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gaattctttatccgagt-acatcaattactttatcaatagattccctaagatattaaggg 624
Query: 64 gttaggaaataccanaaaaaaaaaaaaaaaaaaaaagaatgtatcatttttaaatcatta 123
||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gttaggaaatacc--------aaaaaaaaaaaaaaagaatgtatcatttttaaatcatta 572
Query: 124 aactggcagatttttaaaagacttatttaaatatgtgtgtgtatgtgtgtgtgtgtgtgt 183
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 571 aactggcagatttttaaaagacttatttaaatatgtgtgtgta--tgtgtgtgtgtgtgt 514
Query: 184 gttcatacac------atgtaagtgtgtgaaagtactatgcttgcaaacatggaagccag 237
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gttcatacacatgtgtatgtaagtgtgtgaaagtactatgcttgcaaacatggaagccag 454
Query: 238 gtgccctcatccatcactctcagccgtttgaggcagaacttctctgatctctagtttttg 297
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 453 gtgccctcatccatcattctcagccgtttgaggcagaacttctctgatc-ctagtttttg 395
Query: 298 t 298
|
Sbjct: 394 t 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 697
Length adjustment: 9
Effective length of query: 289
Effective length of database: 688
Effective search space: 198832
Effective search space used: 198832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_p20.g1 MSMg01no356_p20.g1 CHROMAT_FILE:
MSMg01no356_p20.g1 PHD_FILE: MSMg01no356_p20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:52 2005
(250 letters)
>mm_chr10_123190225_123190874
Length = 650
Score = 482 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1 tagacagtgacacatagaaagttaagacatgaaagtagggggtggggacttgtttgagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagacagtgacacatagaaagttaagacatgaaagtagggggtggggacttgtttgagag 260
Query: 61 atagatttcagtggagtggttgaagttcaaacatgataacaggaaagactcattgaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atagatttcagtggagtggttgaagttcaaacatgataacaggaaagactcattgaaaat 320
Query: 121 tacattttcaggtaagttaaaaatagatttgaaaataatcaaagtcacatgagtaggttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacattttcaggtaagttaaaaatagatttgaaaataatcaaagtcacatgagtaggttc 380
Query: 181 ttcctctagagctctattagttaggatgttcaagcttgggggaaaactgtgatgtggttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcctctagagctctattagttaggatgttcaagcttgggggaaaactgtgatgtggttt 440
Query: 241 catatggta 249
|||||||||
Sbjct: 441 catatggta 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
