Query= MSMg01no357_o18.b1 MSMg01no357_o18.b1 CHROMAT_FILE:
MSMg01no357_o18.b1 PHD_FILE: MSMg01no357_o18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:03 2005
(476 letters)
>mm_chr10_65440352_65441227
Length = 876
Score = 905 bits (468), Expect = 0.0
Identities = 471/472 (99%)
Strand = Plus / Plus
Query: 5 gaattcctgcattcatgttctttatgtttctcattaaaagtcattgggttgtacagattg 64
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 205 gaattcctgcattcatgttctttatgtttctcattaaaagccattgggttgtacagattg 264
Query: 65 agtggttttagtatgtgaacttcatctcaatggaagtgattatagggactgtagagatgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agtggttttagtatgtgaacttcatctcaatggaagtgattatagggactgtagagatgg 324
Query: 125 gttaaaggttaagaccatgcaactctttatatacaggacacaaatgtgagcaccagagga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gttaaaggttaagaccatgcaactctttatatacaggacacaaatgtgagcaccagagga 384
Query: 185 tccaatgtgttgttctgacctctgtttgcactggaaacatggtacacatatagagaagtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tccaatgtgttgttctgacctctgtttgcactggaaacatggtacacatatagagaagtt 444
Query: 245 ggtgcatgtgtgcatgctcatgtacttacttacacacacacacatatgcacacacataca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggtgcatgtgtgcatgctcatgtacttacttacacacacacacatatgcacacacataca 504
Query: 305 cagagtcagaaaagcaaaagaaaatgttcaaaaagctattatagaaactaagttctattg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cagagtcagaaaagcaaaagaaaatgttcaaaaagctattatagaaactaagttctattg 564
Query: 365 ttactagtttcaattgttctgaaagggatagctataaatgcaaagggaaaattagataga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttactagtttcaattgttctgaaagggatagctataaatgcaaagggaaaattagataga 624
Query: 425 tagatagatagatagatagatagatagatagatagatagatagatagataga 476
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tagatagatagatagatagatagatagatagatagatagatagatagataga 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 88
Number of extensions: 34
Number of successful extensions: 34
Number of sequences better than 10.0: 1
Number of HSP's gapped: 33
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_o18.g1 MSMg01no357_o18.g1 CHROMAT_FILE:
MSMg01no357_o18.g1 PHD_FILE: MSMg01no357_o18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:03 2005
(525 letters)
>mm_chr15_58172289_58173215
Length = 927
Score = 977 bits (505), Expect = 0.0
Identities = 521/527 (98%), Gaps = 2/527 (0%)
Strand = Plus / Plus
Query: 1 agtataaaactg--gtactcagcagtgccaggtgcagatctcatctaggacagaatagct 58
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 agtataaaactgtggtactcagcagtgccaggtgcagatctcatctaggacagaatagtt 260
Query: 59 atggtggcttgcctgaggtgtccaagttaacttgatagtctctgaatgactccatgtgac 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggtggcttgcctgaggtgtccaagttaacttgatagtctctgaatgactccatgtgac 320
Query: 119 tacaagaccagagattttattattgcagaatcaatacacctgagagacagggcattgacg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacaagaccagagattttattattgcagaatcaatacacctgagagacagggcattgacg 380
Query: 179 gtaatcccattggcactgtgcttagcctaactgtatgtaaaaatcggaagactcaggcga 238
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 gtaatcccattggcactgtgcttagcctaactgtatgtaaaaatcggaagactcaggcaa 440
Query: 239 gccacatgtgtagagaaacaagaaaactcaatagaaccaggcacagttagtgagttttac 298
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 gccacatgtgtagagaaacaagaaaactcaatagaacaaggcacagttagtgagttttac 500
Query: 299 atctcattgcatttcacataggaaggctgtctcttttctcgatgcaggtcttgactgcca 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atctcattgcatttcacataggaaggctgtctcttttctcgatgcaggtcttgactgcca 560
Query: 359 tcctcggtgattgttaataaatgctcgcaatctcccagttcatttggatttcacaaggtc 418
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcctcggtgattgttaataaatgttcgcaatctcccagttcatttggatttcacaaggtc 620
Query: 419 tctacttcccaggcaagaacccaagttcatcaagccaatttggcaaagccgctgatggag 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctacttcccaggcaagaacccaagttcatcaagccaatttggcaaagccgctgatggag 680
Query: 479 gcataaaccataactgtaattaacagaaaggctttgaaactgagcac 525
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcataaaccataactgtaattaacagaaaggctttgaaactgagcac 727
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 927
Length adjustment: 10
Effective length of query: 515
Effective length of database: 917
Effective search space: 472255
Effective search space used: 472255
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
