Query= MSMg01no358_g09.b1 MSMg01no358_g09.b1 CHROMAT_FILE:
MSMg01no358_g09.b1 PHD_FILE: MSMg01no358_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:39 2005
(567 letters)
>mm_chr10_86570888_86571852
Length = 965
Score = 998 bits (516), Expect = 0.0
Identities = 538/546 (98%), Gaps = 2/546 (0%)
Strand = Plus / Plus
Query: 5 gaattcattccgatttcatgggtaggatgcaccagagatgtggagtgctttctttagctt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattccgatttcatgggtaggatgcaccagagatgtggagtgctttctttagctt 264
Query: 65 caggagtgtcttaggtccatgaaaccatcattcctacagagtttcattgaaacttatcca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caggagtgtcttaggtccatgaaaccatcattcctacagagtttcattgaaacttatcca 324
Query: 125 tcggagcctctctgtagcaatgctgtctgtcactagatttttaaactcacccctccccca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcggagcctctctgtagcaatgctgtctgtcactagatttttaaactcacccctccccca 384
Query: 185 ccccggtgtgtgtgtgtggaaaggtgtatttcctcatatatgaaactctgcctgtgttat 244
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccccggtgtgtgtgtg--gaaaggtgtatttcctcatatatgaaactctgcctgtgttat 442
Query: 245 atgctactcacccctcccgactccctgatatactaaaccttctggtttattcaagattct 304
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 443 atgctactcacccctcccgacttcctgatatactaaaccttctagtttattcaagattct 502
Query: 305 gatatattctgaatgtcttataagctcaacaggtcaacttgaaaatctatcggagtcaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gatatattctgaatgtcttataagctcaacaggtcaacttgaaaatctatcggagtcaga 562
Query: 365 aatacttttgaaccatctccatttcttttctacagaattctgtattagtttttataacca 424
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aatactttttaaccatctccatttcttttctacagaattctgtattagtttttataacca 622
Query: 425 tacatgccccttaatgaatacaaattttagttagaacagaacagacatccagatgacatc 484
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tacatgccccttaataaatacaaattttagttagaacagaacagacatccagatgacatt 682
Query: 485 ctaacacacacacacacacacacacacacacacacacacacacacacacacacacacaca 544
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 683 ctaacacacacacacacacacacacacacacacacacacacacacacacactcacacaca 742
Query: 545 cacaca 550
||||||
Sbjct: 743 cacaca 748
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 237
Number of extensions: 52
Number of successful extensions: 52
Number of sequences better than 10.0: 1
Number of HSP's gapped: 49
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 965
Length adjustment: 10
Effective length of query: 557
Effective length of database: 955
Effective search space: 531935
Effective search space used: 531935
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_g09.g1 MSMg01no358_g09.g1 CHROMAT_FILE:
MSMg01no358_g09.g1 PHD_FILE: MSMg01no358_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:39 2005
(506 letters)
>mm_chr10_86747138_86748046
Length = 909
Score = 663 bits (343), Expect = 0.0
Identities = 354/359 (98%), Gaps = 3/359 (0%)
Strand = Plus / Minus
Query: 1 ctgtgttagtttagaggattcttgataacgattatcatgtagtagatgtgtgggttagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ctgtgttagtttagaggattcttgataacgattatcatgtagtagatgtgtgggttagct 300
Query: 61 tttactgcttaacaatctaacccaaattctatagcatgaaaaaaa---ctccattttctc 117
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 299 tttactgcttaacaatctaacccaaattctatagcatgaaaaaaactcctccattttctc 240
Query: 118 gtgatcctgatatttggcagttgaggtggggttcagcctggcagttctggtcttggctgg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gtgatcctgatatttggcagttgaggtggggttcagcctggcagttctggtcttggctgg 180
Query: 178 tcccttctaggcatttgccaacagttgctgggataccttggctcccagcattcattgcac 237
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tctcttctaggcatctgccaacagttgctgggataccttggctcccagcattcattgcac 120
Query: 238 ttctccgtcctttgctgataaatgcaggcttgttcctctggaagagacatctaagagagc 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ttctccgtcctttgctgataaatgcaggcttgttcctctggaagagacatctaagagagc 60
Query: 298 agatgggaagaaggcctcttgaagtctgggcctcataactggcacaagattacccctac 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 agatgggaagaaggcctcttgaagtctgggcctcataactggcacaagattacccctac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 909
Length adjustment: 10
Effective length of query: 496
Effective length of database: 899
Effective search space: 445904
Effective search space used: 445904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|