Query= MSMg01no358_m24.b1 MSMg01no358_m24.b1 CHROMAT_FILE:
MSMg01no358_m24.b1 PHD_FILE: MSMg01no358_m24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:10 2005
(484 letters)
>mm_chr10_28459929_28460813
Length = 885
Score = 853 bits (441), Expect = 0.0
Identities = 468/481 (97%), Gaps = 9/481 (1%)
Strand = Plus / Plus
Query: 6 ttcttaaaaatct--tacaacattatgcaaaagtgtatttaaaatatacttttctggtaa 63
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ttcttaaaaatctgata-aacattatgcaaaagtgtatttaaaatatacttttctggtaa 264
Query: 64 gtagtatcttgatctgtttttgaagaaagcttgttaaaagaagcaagatgtttctgcctg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtagtatcttgatctgtttttgaagaaagcttgttaaaagaagcaagatgtttctgcctg 324
Query: 124 gctgtgaggacaaaggggagctcagagtggctctgtacagaactctgtctcacagaactt 183
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gctgggaggacaaaggggagttcagagtggctctgtacagaactctgtctcacagaactt 384
Query: 184 gcttccaaagcaggaactagttttccacattttctgggtcagattctcataagccgtgcc 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 385 gcttccaaagcaggaactagttttccacattttctgggtcagattctcataagctgtgcc 444
Query: 244 attcccactgtgctcacttatgcaaactaaactcagctgtgactattagacaaaatattt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attcccactgtgctcacttatgcaaactaaactcagctgtgactattagacaaaatattt 504
Query: 304 tcctgacaaaaaagggatccctgtacaaactatgggagaaaatacaaattagcatgcaga 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 505 tcctgacaaaaaagggatccctgtacaaactatgggagaaaatacaaattagcacgcaga 564
Query: 364 agaaagccagtcttttgtggtaatatactgttttaattttggggtcacctgtcttgcaca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agaaagccagtcttttgtggtaatatactgttttaattttggggtcacctgtcttgcaca 624
Query: 424 tttaagacatagattctttttctaagtttctagcaatcacatatatcacctgaaagacaa 483
||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 625 tttaagacatagattct------aagtttctagcaatcacatatatcacctgaaagacaa 678
Query: 484 a 484
|
Sbjct: 679 a 679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 885
Length adjustment: 10
Effective length of query: 474
Effective length of database: 875
Effective search space: 414750
Effective search space used: 414750
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_m24.g1 MSMg01no358_m24.g1 CHROMAT_FILE:
MSMg01no358_m24.g1 PHD_FILE: MSMg01no358_m24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:10 2005
(470 letters)
>mm_chr10_28620668_28621537
Length = 870
Score = 806 bits (417), Expect = 0.0
Identities = 423/425 (99%)
Strand = Plus / Minus
Query: 46 ccgtagtcaaacttcttgagttacttgtatatactggatattagccctttattagatgta 105
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 870 ccgtagtcaaacttcttgagttacttgtatatactggatattagccctctattagatgta 811
Query: 106 gcgttggtaaagatcttttcccaatctgtgggttgctattgacagtgttctttctcttac 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 gcgttggtaaagatcttttcccaatctgtgggttgctattgacagtgttctttctcttac 751
Query: 166 agaatcttttcaattttatgaaatctaatttgtcaattgttgatcttgaagcataagcca 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 agaatcttttcaattttatgaaatctaatttgtcaattgttgatcttgaagcataagcca 691
Query: 226 ttggtgttctattcaggaaaggaatacctcactgtgagtggacttggagtgtttataact 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ttggtgttctattcaggaaaggaatacctcactgtgagtggacttggagtgtttataact 631
Query: 286 ttaacccacttccattttgcttttcctcttcacacatgtgaatattaatatgatcttcag 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ttaacccacttccattttgcttttcctcttcacacatgtgaatattaatatgatcttcag 571
Query: 346 cttagtgttcttcctatacaaacagtcataatttctatatgtgtagggtaccttggaact 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 cttagtgttcttcctatacaaacagtcataatttctatatgtgtagggtaccttggaact 511
Query: 406 ggggatttgtgtaaaaatattttaatagtatgttcattttcaatatgaaacaagttttct 465
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ggggatttgtgtaacaatattttaatagtatgttcattttcaatatgaaacaagttttct 451
Query: 466 aattt 470
|||||
Sbjct: 450 aattt 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
