Query= MSMg01no360_c03.b1 MSMg01no360_c03.b1 CHROMAT_FILE:
MSMg01no360_c03.b1 PHD_FILE: MSMg01no360_c03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:48 2005
(393 letters)
>mm_chr10_105158187_105158979
Length = 793
Score = 667 bits (345), Expect = 0.0
Identities = 355/359 (98%), Gaps = 2/359 (0%)
Strand = Plus / Minus
Query: 31 aggaggatgagattaaacacaaccctggctatggggaaaattcaaagccagccagggcta 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 aggaggatgagattaaacacaaccctggctatggggaaaattcaaagccagccagggcta 734
Query: 91 catatgattatatttcagagacagaggtagatgcagaggcagaggaagagacagaaacag 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 catatgattatatttcagagacagaggtagatgcagaggcagaggaagagacagaaacag 674
Query: 151 aaatagagaaacagagagagacagagagtcaagggggtccgggtgggggggagagggatg 210
|||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 673 aaatagagaaacagggagagacagagagtcaagggggtctgggtgggggggagagggatg 614
Query: 211 ggggaacaataacaacagcaacaacaacaacaaacaggttgatggttgacatggcagtaa 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ggggaacaataacaacagcaacaacaacaacaaacaggttgatggttgacatggcagtaa 554
Query: 271 gtttcctgtgtagccctggggcctaggcatattaaatgtgtcagtggagaaaacagcagt 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gtttcctgtgtagccctggggcctaggcatattaaatgtgtcagtggagaaaacagcagt 494
Query: 331 ggtccctctccaggggtagatatgctcttctgtcagtactacttttttttttcccctta 389
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 493 ggtccctctccaggggtagatatgctcttctgtcagtactac--ttttttttcccctta 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space: 301056
Effective search space used: 301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no360_c03.g1 MSMg01no360_c03.g1 CHROMAT_FILE:
MSMg01no360_c03.g1 PHD_FILE: MSMg01no360_c03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:48 2005
(496 letters)
>mm_chr10_105016297_105017192
Length = 896
Score = 905 bits (468), Expect = 0.0
Identities = 486/496 (97%), Gaps = 7/496 (1%)
Strand = Plus / Plus
Query: 1 tctcctacgtgccttatcaggattcacatgaaagccagttgccagcattctccctctggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tctcctacgtgccttatcaggattcacatgaaagccagttgccagcattctccctctggt 267
Query: 61 caaagctttgtcatgagtcatttcctctgatctctgatcttcagagcttcagcccaactt 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 268 caaagctttgtcatgagtcatttcctctgatct-------tcagagcttcagcccaactt 320
Query: 121 gcctttatttataaaacaacatccaccttctgagtatttttagttattagatattatcct 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcctttatttataaaacaacttccaccttctgagtatttttagttattagatattatcct 380
Query: 181 gagcgccttctgtttattatctcactaatctgagagagctaaataaagaagtagaggcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagcgccttctgtttattatctcactaatctgagagagctaaataaagaagtagaggcac 440
Query: 241 acatgggtttagtcaacagcccatggtcttgtagcctctaagtagtgacactaatatttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatgggtttagtcaacagcccatggtcttgtagcctctaagtagtgacactaatatttg 500
Query: 301 taagtcacaaagtctctgttttggtcattcctcaatagagtcttgatacccattctcccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taagtcacaaagtctctgttttggtcattcctcaatagagtcttgatacccattctcccg 560
Query: 361 ttcaggagtcacacttttcttagcatcaagggaaggaactacagatagccatgatgctct 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 ttcaggagtcacacttttcttagcatcaagggaaggaactacagatagccatgatgcttt 620
Query: 421 aagtatatttaatgttctacctctcctacatttccacagctctttttggataaattactg 480
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 aagtatatttaatgttctacctctcctacatttccacagttctttttggataaattactg 680
Query: 481 tgaatatttttatttt 496
||||||||||||||||
Sbjct: 681 tgaatatttttatttt 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
