Query= MSMg01no361_n05.b1 MSMg01no361_n05.b1 CHROMAT_FILE:
MSMg01no361_n05.b1 PHD_FILE: MSMg01no361_n05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:59 2005
(590 letters)
>mm_chr10_11129844_11130832
Length = 989
Score = 1077 bits (557), Expect = 0.0
Identities = 578/585 (98%), Gaps = 3/585 (0%)
Strand = Plus / Plus
Query: 5 gaattctttccagcttatttcctttaggtagctccactgtatcaaggacttggggtcctg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttccagcttatttcctttaggtagctccactgtatcaaggacttggggtcctg 264
Query: 65 tttaaatctgactacattagcaatgtgactttgctttcaaaaatatatttaatatttaat 124
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttaaatctaactacattagcaatgtgactttgctttcaaaaatatatttaatatttaat 324
Query: 125 agccaggagaagtttcttttttaaaaatgaagatatcatgttaattaaaattttatgaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agccaggagaagtttcttttttaaaaatgaagatatcatgttaattaaaattttatgaaa 384
Query: 185 taaggaacttcataaaagttttatttatcccacattcctattttcttgccctaaaaaa-g 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 385 taaggaacttcataaaagttttatttatcccacattcctattttcttgccctaaaaaaag 444
Query: 244 tatttttagtaattataatattgaaggacagaaaaaggcttctaggtaactataattcta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatttttagtaattataatattgaaggacagaaaaaggcttctaggtaactataattcta 504
Query: 304 tcaaacttatgcctgaggctcttattccttaaaaaaaaatgaaatgtaaaacattgttga 363
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 505 tcaaactt-tgcctgaggctcttattccttaaaaaaaa-tgaaatgtaaaacattgttga 562
Query: 364 atcatattttacctcatacaatgccaaagaatatggtttatacaatagtttatttgaaat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atcatattttacctcatacaatgccaaagaatatggtttatacaatagtttatttgaaat 622
Query: 424 tcttccccttctgtagcatgtagtttttattactccactttaagctccaggcagacagaa 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 623 tcttccccttctgtagcatgtagtttttattactccactttaagctccaggcagacggaa 682
Query: 484 ctaccagccccacccaggttcccctggatccgcggatgaaacacacacacacacacacac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ctaccagccccacccaggttcccctggatccgcggatgaaacacacacacacacacacac 742
Query: 544 acacacacacacacacacacacacacacacacgcacatacacaca 588
||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 743 acacacacacacacacacacacacacacatacacacatacacaca 787
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 117
Number of extensions: 48
Number of successful extensions: 48
Number of sequences better than 10.0: 1
Number of HSP's gapped: 40
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 989
Length adjustment: 10
Effective length of query: 580
Effective length of database: 979
Effective search space: 567820
Effective search space used: 567820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_n05.g1 MSMg01no361_n05.g1 CHROMAT_FILE:
MSMg01no361_n05.g1 PHD_FILE: MSMg01no361_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:59 2005
(537 letters)
>mm_chr10_11310682_11311618
Length = 937
Score = 764 bits (395), Expect = 0.0
Identities = 417/427 (97%), Gaps = 8/427 (1%)
Strand = Plus / Minus
Query: 1 tcagagcagaaactgaggctttgctttaacctctgaggaagaaggaaggcatatgacaaa 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 424 tcagagcagaaactgaggctttactttaacctctgaggaagaaggaaggcatatgacaaa 365
Query: 61 ttcagaaggatgtatctaagcttcatatcacttatctccttcgtttttcatggagtaaaa 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 364 ttcagaaggatgtatctaagcttcatatcacttatcttcttcgtttttcatggagtaaaa 305
Query: 121 aattaagctaataaaacaactcataataccttctatcatagcaccagagattctcataca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aattaagctaataaaacaactcataataccttctatcatagcaccagagattctcataca 245
Query: 181 tccatgagactgatatgcagatggttcctggtttatgaggtccttgaagctggtctttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tccatgagactgatatgcagatggttcctggtttatgaggtccttgaagctggtctttgc 185
Query: 241 tacttagtgggtggttcttttttcccaaactttatcctcctagtttcatacactaatact 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tacttagtg---ggttcttttttcccaaactttatcctcctagtttcatacactaatact 128
Query: 301 agataggaaataaacaaggatggaggggaaaagtgagagacaaggagagagcaaggagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 agataggaaataaacaaggatggaggggaaaagtgagagacaaggagagagcaaggagag 68
Query: 361 atgggaaagagagagagagagagagagagagagagagagagaga---a-agagag-ggaa 415
|||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||
Sbjct: 67 atgggaaagagagagagagagagagagagagagagagagagagagagagagagagaggaa 8
Query: 416 gcaggag 422
|||||||
Sbjct: 7 gcaggag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
