Query= MSMg01no362_a24.b1 MSMg01no362_a24.b1 CHROMAT_FILE:
MSMg01no362_a24.b1 PHD_FILE: MSMg01no362_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:17 2005
(507 letters)
>mm_chr10_58772007_58772913
Length = 907
Score = 901 bits (466), Expect = 0.0
Identities = 496/506 (98%), Gaps = 3/506 (0%)
Strand = Plus / Plus
Query: 5 gaattccagcctagtcttttggtagttaaagaaagacagtcgggctggagagatggctca 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 202 gaattccagcctagtcttttggtagttaaagaaaaacagtcgggctggagagatggctca 261
Query: 65 gcagttaagagcactgactgctcttccagaggtcttcagttcaattcccagtaaccacat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gcagttaagagcactgactgctcttccagaggtcttcagttcaattcccagtaaccacat 321
Query: 125 ggtgactcacaaccatctgtaatgggatctgatgcccttttctggtatgtctgaagagag 184
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 322 ggtgactcacaaccatctgtaatgggatctgatgccctttcctggtatgtctgaagagag 381
Query: 185 tgacagtgtactcatatacataacataaatacat-c-ta-aaaaaataaaaaataaaata 241
||||||| ||||||||||||||||||||||| || | || ||||||||||||||||||||
Sbjct: 382 tgacagtatactcatatacataacataaataaatacatataaaaaataaaaaataaaata 441
Query: 242 aaataaagacaattgtgtatttaaagatacaaccattcattgaaccaacagatacttgtt 301
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 442 aaataaagacaattgtgtatttaaagatacaaccattcattgagccaacagatacttgtt 501
Query: 302 gaagcctatcacatgccaagcatcatgttagagctggagatccattggtggataactgtt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gaagcctatcacatgccaagcatcatgttagagctggagatccattggtggataactgtt 561
Query: 362 tctgccatgaaaggctacagcgtttgtgcatgtttgtgttgcatatgcagacaagtaaag 421
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 562 tctgccatgaaaggctacagcgtttgtgcatgtttgtgttgcgtatgcagacaagtaaag 621
Query: 422 ggggtgagcattaagtatgggagatcacagcttacttaatcagtctttgatacattccaa 481
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 622 ggggtgagcattaagtatgggagatcacagcttacttaatcagtctttgatacatttcaa 681
Query: 482 gaagggacatcagggagaaaggcata 507
||||||||||||||||||||||||||
Sbjct: 682 gaagggacatcagggagaaaggcata 707
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_a24.g1 MSMg01no362_a24.g1 CHROMAT_FILE:
MSMg01no362_a24.g1 PHD_FILE: MSMg01no362_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:17 2005
(469 letters)
>mm_chr10_58952988_58953856
Length = 869
Score = 835 bits (432), Expect = 0.0
Identities = 447/452 (98%)
Strand = Plus / Minus
Query: 1 caaggactgaactgaggttgtctggcttggcagtgagtacctgtacctgctcggccacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 caaggactgaactgaggttgtctggcttggcagtgagtacctgtacctgctcggccacct 393
Query: 61 ctgcagcccacttgctggtttacagaccgtattcccactcctgggtctcttggaggtcag 120
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 392 ctgcagcccacttgctgatttacagactgtattcccactcctgggtctcttggaggtcag 333
Query: 121 ggaaaggggatgacggttagagaaagggatgtggaactgggatgagggtgaattcagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ggaaaggggatgacggttagagaaagggatgtggaactgggatgagggtgaattcagaga 273
Query: 181 gttaactaacacaaactagttgtccgtcaagtcttcataggtcctcaatggtcattcacg 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gttaactaacacagactagttgtccgtcaagtcttcataggtcctcaatggtcattcacg 213
Query: 241 tttagaaacaggtgatgagttacttctctgccggtgaaatgagccagttcaagccagttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 tttagaaacaggtgatgagttacttctctgccggtgaaatgagccagttcaagccagttt 153
Query: 301 tggttatattaaatgcaggtttattgggaagctgctcttggataagtttgctggccccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 tggttatattaaatgcaggtttattgggaagctgctcttggataagtttgctggccccaa 93
Query: 361 ggaccgaggccagggaagtcaccatgggaagggagagagaggaaatggggaagaaaaagc 420
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 92 ggaccgaggccagggaagtcaccatgggaagggagagagaggagacggggaagaaaaagc 33
Query: 421 gagaaagtgtgcgtgcagagagacaggagagg 452
||||||||||||||||||||||||||||||||
Sbjct: 32 gagaaagtgtgcgtgcagagagacaggagagg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
