Query= MSMg01no362_j08.b1 MSMg01no362_j08.b1 CHROMAT_FILE:
MSMg01no362_j08.b1 PHD_FILE: MSMg01no362_j08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:00 2005
(443 letters)
>mm_chr10_109003045_109003887
Length = 843
Score = 833 bits (431), Expect = 0.0
Identities = 437/439 (99%)
Strand = Plus / Minus
Query: 5 gaattcaggggtactgaccttccatgtgcctccctttccactgtagagcatgcgtaggag 64
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 643 gaattcaggggtactgaccttccatgtgcctccctttccactgtagagcatgtgtaggag 584
Query: 65 gtggcgggtgaaggaagaacagagcttagcagatagctaaaaggaaatttaaaaggggaa 124
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 583 gtggcgggtgaaggaagaacagagcttagcagatagctaaaaggaaacttaaaaggggaa 524
Query: 125 cattgtttattatttccagtgccattttgttctttataagtgtgtaatggttactagaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 cattgtttattatttccagtgccattttgttctttataagtgtgtaatggttactagaca 464
Query: 185 tatatgtatacctaaactatgtaatataaaatatgtttatattttcattatatcctataa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tatatgtatacctaaactatgtaatataaaatatgtttatattttcattatatcctataa 404
Query: 245 gttgtgtcatatgcatgatagcagaagccatgctgcttattgtagtactttcttctgaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gttgtgtcatatgcatgatagcagaagccatgctgcttattgtagtactttcttctgaat 344
Query: 305 aactgagcatggatagcatatgctacagtgtagagcatatgtcagatacttacggtatta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 aactgagcatggatagcatatgctacagtgtagagcatatgtcagatacttacggtatta 284
Query: 365 tgtcagtttgtctaattacctgaaacacagttcactttgtatagggatgctgttctatgt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tgtcagtttgtctaattacctgaaacacagttcactttgtatagggatgctgttctatgt 224
Query: 425 gcttctaaagtgacatttt 443
|||||||||||||||||||
Sbjct: 223 gcttctaaagtgacatttt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_j08.g1 MSMg01no362_j08.g1 CHROMAT_FILE:
MSMg01no362_j08.g1 PHD_FILE: MSMg01no362_j08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:00 2005
(381 letters)
>mm_chr10_108809715_108810495
Length = 781
Score = 520 bits (269), Expect = e-152
Identities = 300/311 (96%), Gaps = 4/311 (1%)
Strand = Plus / Plus
Query: 1 tgttaaagatcacctgtttactttagtgttggctacagttgtggagcaatctttatccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttaaagatcacctgtttactttagtgttggctacagttgtggagcaatctttatccat 260
Query: 61 attctgttatctatgctttctggtcccagtgaggcacatacctatcttatgatcactctt 120
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 attctgttatccatgctttctggtcccaatgaggcacatacctatcttatgatcactctt 320
Query: 121 attacaaaagagtgattcttagtgttctatggcttctcaggggcctccactcacaattcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attacaaaagagtgattcttagtgttctatggcttctcaggggcctccactcacaattcc 380
Query: 181 ttgttgggtcctaggttatcttcatctatgtttaaagacttctctatctattatggaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgttgggtcctaggttatcttcatctatgtttaaagacttctctatctattatggaatt 440
Query: 241 aggattctctctctctctctctctc--tctcactctctctctctctctctctctctccct 298
||||||||||||||||||| ||||| |||| ||| ||||| ||||| ||| ||||||||
Sbjct: 441 aggattctctctctctctccctctccctctc-ctccctctccctctc-ctccctctccct 498
Query: 299 ctctctctctc 309
||||| |||||
Sbjct: 499 ctctccctctc 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
