Query= MSMg01no363_d15.b1 MSMg01no363_d15.b1 CHROMAT_FILE:
MSMg01no363_d15.b1 PHD_FILE: MSMg01no363_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:52 2005
(635 letters)
>mm_chr10_108868182_108869216
Length = 1035
Score = 1191 bits (616), Expect = 0.0
Identities = 628/632 (99%)
Strand = Plus / Plus
Query: 4 ggaattcttcctctgtctcactcccagagcttccatcctctccattcccacagacagcat 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttcctctggctcactcccagagcttccatcctctccattcccacagacagcat 263
Query: 64 tgtgatcgttaccaaaaatagcccaattttgttctatttactttctttcttgcatctccc 123
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtgatcgttaccaaaaatagtccaattttgttctatttactttctttcttgcatctccc 323
Query: 124 catccaactggccagattcaaatagttttctagaataatattcatcactctaattatgtt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 catccaactggccagattcaaatagttttctagaataatattcatcactctaattatgtt 383
Query: 184 gttaacaactttatgctttctctctgcccttgggaaggagcctaccttgcttaggacagt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gttaacaactttatgctttctctctgcccttgggaaggagcctaccttgcttaggacagt 443
Query: 244 tgaaagaaaggtaatcaacttctagagttcatttctttctttgttatctgccaccgtgag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgaaagaaaggtaatcaacttctagagttcatttctttctttgttatctgccaccgtgag 503
Query: 304 tccttgccaggatcctgagtctccaaacctttccccacttggtattgtaggtcagagaca 363
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tccttgccaggatcccgagtctccaaacctttccccacttggtattgtaggtcagagaca 563
Query: 364 catggcatgcttctccacagcacatctttcccattgctgtacttataaagttgatatatt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 catggcatgcttctccacagcacatctttcccattgctgtacttataaagttgatatatt 623
Query: 424 catctgtcttcttttttcaaccttaccactagactacaaactctgtgcatgtagataccc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 catctgtcttcttttttcaaccttaccactagactacaaactctgtgcatgtagataccc 683
Query: 484 ggccttaaatttcatcctactcttggttcaaggcacaggaataaacattgtttcagggta 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ggccttaaatttcatcctactcttggttcaaggcacaggaataaacattgtttcagggta 743
Query: 544 ttgataaattttaacattaactacaaaactataattaaagttggtgaatatctacaggca 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ttgataaattttaacattaactacaaaactataattaaagttggtgaatatctacaggca 803
Query: 604 tataggattttaaaacatcatgaataatagca 635
|||||||||||||||||||| |||||||||||
Sbjct: 804 tataggattttaaaacatcaggaataatagca 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_d15.g1 MSMg01no363_d15.g1 CHROMAT_FILE:
MSMg01no363_d15.g1 PHD_FILE: MSMg01no363_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:52 2005
(505 letters)
>mm_chr10_109044087_109044992
Length = 906
Score = 932 bits (482), Expect = 0.0
Identities = 500/506 (98%), Gaps = 1/506 (0%)
Strand = Plus / Minus
Query: 1 tgagttgtgtgtagagaaaaattttcttagtaataattaaattgcacaagtaattgccgc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 569 tgagttgtgtgtagagaaaaattttcttagtaataattaaattgcacaagtaattgccac 510
Query: 61 attgcagcagcataatgtagatgtaatctacttcccagaaatcgtctgctatttgtcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 attgcagcagcataatgtagatgtaatctacttcccagaaatcgtctgctatttgtcaca 450
Query: 121 gagggaaactacagaatgcagttaaacttttaaaagaactagcggggaaggactgaaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gagggaaactacagaatgcagttaaacttttaaaagaactagcggggaaggactgaaagc 390
Query: 181 tattttttttgaaggacagtaaggttctcacttgcattttgttttgcagatgaattcagt 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 389 tattttttttgaaggacagtaaggttctcacttgcattttgttttgccgatgaattcagt 330
Query: 241 cttctagattcctttggtatgactcatggtc-ttttttttagaaacgtgttctttttcag 299
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 329 cttctagattcctttggtatgactcatggtctttttttttagaaacgtgttctttttcag 270
Query: 300 acagatagaatgcaaagaattttcctgagctagcttttgctgagagcagccttgaaactg 359
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 269 acagatagaatgcaaagaattttcctgagctagcttttgctgagaacagccttgaaactg 210
Query: 360 agagtgatcagccgggcatggtggcacacgcctttaatcccagcacctgggaggcagagg 419
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 agagtgatcagctgggcatggtggcacacgcctttaatcccagcacctgggaggcagagg 150
Query: 420 caggcggatttctgagttcaaggccagcctagtctacaaagtgagttccaggacagccag 479
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 caggcagatttctgagttcaaggccagcctagtctacaaagtgagttccaggacagccag 90
Query: 480 agctatacagagaaaccctgtctcaa 505
||||||||||||||||||||||||||
Sbjct: 89 agctatacagagaaaccctgtctcaa 64
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 906
Length adjustment: 10
Effective length of query: 495
Effective length of database: 896
Effective search space: 443520
Effective search space used: 443520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
