XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATCTTGAT
TAACTATTTAAGTTAAAAAAAAACAAGCAAATACACATTGTCTAACTGTA
TTCAACATGGAAAACTAGAATATCTTAAAACAGATACATCTGGACTTGAA
AAGACTACTGCCCTTCTCAGCAAACTTGACTTATCTATGAAGGGCATTTG
GGAAGCAGGGACCCACCTTCTTAGTACTTGTAGCTGGGGGTGTAGAGGTG
AAGACAGGGGTAGGGTCTGAGGAATGTAGAGGTGGGACACAGGATGACTC
CATAGGGATGTCACATAGATTACAATGGAGTGTTTTCTAACTTTCTGGTC
ATCCCAGCCAACCCTGGCTCGGTTGTCCTTTTGTTGACACTATTTGAGAA
GTGAAATGATTTTGTTTCCCTGAGCATCAGGGGCAGTCTCCCACGTGCCA
AAGATTTGCCCATGGACTCAGCATTGTTCCTACACACACTTATACAGTTC
TCATCACTTTATTACCTTTCTTTAAAAAAAAATCAAGAAATCTACTAATG
AACCTATGTATACATGCATAACCGCAAAGCCCACGCATCTCATACATGTA
TATGGCTTCGACAGTCATTAACAAAAGTGCACACCTTGTTTATCTAGTCA
GCCCTTTACTGGAAAGTTTCTTTGTACCCCTTGGAAAGAAGCGCAGTTAA
CGGAAATTTTGATCACCCAATAGGCCTTCAAGATGCTTTTGTCCGAAAAT
TTTTAACTCCCTTGCTGCG

NAAACGCCCAAAAATCACGACAAAGAGACACCCAAGACATCGCCGCCGAG
CGACAGGTGGCGCGGAGCACAACTNCCCACCAACCAAAAAAAACCACCCC
CCCCCCCCCCCCCCCCCCCCCCCCACCCCCCACCCCCCACCAACCCNCCC
AACCCCCCCCCCACCACCCACCACCCAAAAAAAAAA

Query= MSMg01no363_j21.b1 MSMg01no363_j21.b1 CHROMAT_FILE:
MSMg01no363_j21.b1 PHD_FILE: MSMg01no363_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:23 2005
         (576 letters)



>mm_chr10_28219455_28220433
          Length = 979

 Score = 1011 bits (523), Expect = 0.0
 Identities = 561/575 (97%), Gaps = 3/575 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcatcttgattaactatttaagttaaaaaaaaacaagcaaatacacattgtctaac 64
           ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 779 gaattcatcttgattaagtatttaagttaaaaaaaaccaagcaaatacacattgtctaac 720

                                                                       
Query: 65  tgtattcaacatggaaaactagaatatcttaaaacagatacatctggacttgaaaagact 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tgtattcaacatggaaaactagaatatcttaaaacagatacatctggacttgaaaagact 660

                                                                       
Query: 125 actgcccttctcagcaaacttgacttatctatgaagggcatttgggaagcagggacccac 184
            |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 cctgctcttctcagcaaacttgacttatctatgaagggcatttgggaagcagggacccac 600

                                                                       
Query: 185 cttcttagtacttgtagctgggggtgtagaggtgaagacaggggtagggtctgaggaatg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 cttcttagtacttgtagctgggggtgtagaggtgaagacaggggtagggtctgaggaatg 540

                                                                       
Query: 245 tagaggtgggacacaggatgactccatagggatgtcacatagattacaatggagtgtttt 304
           |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 539 tagaggtgggacacaggatgaccccatagggatgtcacgtagattacaatggagtgtttt 480

                                                                       
Query: 305 ctaactttctggtcatcccagccaaccctggctcggttgtccttttgttgacactatttg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ctaactttctggtcatcccagccaaccctggctcggttgtccttttgttgacactatttg 420

                                                                       
Query: 365 agaagtgaaatgattttgtttccctgagcatcaggggcagtctcccacgtgccaaagatt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 419 agaagtgaaatgattttgtttccctgagcatcaggggcagtctcccacgtgccaaagatc 360

                                                                       
Query: 425 tgcccatggactcagcattgttcctacacacacttatacagttctcatcactttattacc 484
           |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 359 tgcctatggactcagcattgttcctacgcacacttatacagttctcatcactttattacc 300

                                                                       
Query: 485 tttctttaaaaaaaaa---tcaagaaatctactaatgaacctatgtatacatgcataacc 541
           ||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tttctctaaaaaaaaaaaatcaagaaatctactaatgaacctatgtatacatgcataacc 240

                                              
Query: 542 gcaaagcccacgcatctcatacatgtatatggctt 576
           ||||||||||| |||||||||||||||||||||||
Sbjct: 239 gcaaagcccacacatctcatacatgtatatggctt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 979
Length adjustment: 10
Effective length of query: 566
Effective length of database: 969
Effective search space:   548454
Effective search space used:   548454
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)