Query= MSMg01no363_m22.b1 MSMg01no363_m22.b1 CHROMAT_FILE:
MSMg01no363_m22.b1 PHD_FILE: MSMg01no363_m22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:38 2005
(575 letters)
>mm_chr10_67518505_67519479
Length = 975
Score = 1104 bits (571), Expect = 0.0
Identities = 571/571 (100%)
Strand = Plus / Plus
Query: 5 gaattcttaacctccgagccatcttgttcagccactggggtcagctttcaaattaggctg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttaacctccgagccatcttgttcagccactggggtcagctttcaaattaggctg 264
Query: 65 tttcaatctgtcgattgatttgctatatagctctaactagactataacttgctcttttag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttcaatctgtcgattgatttgctatatagctctaactagactataacttgctcttttag 324
Query: 125 accaggctaaccttgaagctctgccagacctctctccggattgttgagattataggtgtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 accaggctaaccttgaagctctgccagacctctctccggattgttgagattataggtgtg 384
Query: 185 agctaccagtcccggctgttcaaagcctttgtgttcacatgatagcccgtgtgactaggt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agctaccagtcccggctgttcaaagcctttgtgttcacatgatagcccgtgtgactaggt 444
Query: 245 ttaaatccatcatatcactatcagattccttttgctctctgccttccccccactctgctt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttaaatccatcatatcactatcagattccttttgctctctgccttccccccactctgctt 504
Query: 305 tcctgagaattaaccaagttgttggaattattcagtgaatcacctttatgatgtttaagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcctgagaattaaccaagttgttggaattattcagtgaatcacctttatgatgtttaagc 564
Query: 365 tgaaactttgtgctgtaatagctcacctgggtatatatataatgaaagtcatttcaatac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgaaactttgtgctgtaatagctcacctgggtatatatataatgaaagtcatttcaatac 624
Query: 425 ataaacagtaaagtgtgtctgctctattacagcctcataaactggtcagaagaaggacac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ataaacagtaaagtgtgtctgctctattacagcctcataaactggtcagaagaaggacac 684
Query: 485 tttttttattatgcccaacacatgatacagttgtgcatcatacgatacaaagtcgcatga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tttttttattatgcccaacacatgatacagttgtgcatcatacgatacaaagtcgcatga 744
Query: 545 tgtatggagcaccaattccacagcacatgag 575
|||||||||||||||||||||||||||||||
Sbjct: 745 tgtatggagcaccaattccacagcacatgag 775
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_m22.g1 MSMg01no363_m22.g1 CHROMAT_FILE:
MSMg01no363_m22.g1 PHD_FILE: MSMg01no363_m22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:38 2005
(263 letters)
>mm_chr8_10060415_10061077
Length = 663
Score = 480 bits (248), Expect = e-140
Identities = 260/264 (98%), Gaps = 2/264 (0%)
Strand = Plus / Plus
Query: 1 tatatctggcaaacaaagagtaaactcggtcatggaaaactgagagatgctcccccaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatatctggcaaacaaagagtaaactcggtcatggaaaactgagagatgctcccccaaca 260
Query: 61 ttaaataaaagaaag-taaccatgtgtatgttttagaaaaaaaacattgaccatacataa 119
||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 ttagataaaagaaagataaccatgtgtatgttttagaaaaaaa-cattgaccatacataa 319
Query: 120 agtatttgttggagaaaattaagcattaaagacagagaggttgagtcagaaagggaaagg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agtatttgttggagaaaattaagcattaaagacagagaggttgagtcagaaagggaaagg 379
Query: 180 ctgaggagtcttaggacaggagaagagtctccgtcacagaggggaccacaccctagtctg 239
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctgaggagtcttaggataggagaagagtctccgtcacagaggggaccacaccctagtctg 439
Query: 240 ctgtggcttgaattctcattttac 263
||||||||||||||||||||||||
Sbjct: 440 ctgtggcttgaattctcattttac 463
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 263
Length of database: 663
Length adjustment: 9
Effective length of query: 254
Effective length of database: 654
Effective search space: 166116
Effective search space used: 166116
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
