NTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATTATTACCTAAAAATAAAAATGAATTAAATGAACAATTCAAACA
TGCAATTATAAAAAAGGTATCTTATAATTACCATGTATTTTTGTTTTGAA
TAAATTGATGAGATATTTTTTGTAATATTTCATCTAGAGGACAGCTTTTA
ACCCCAAACGTCAGCTATTTCTCAGAATAGTGACAATGATTATTGAAAGA
CAAAGAAGCATCAGCATACTGAACAGAATTATGAAGATAAGGGAGATTAA
GAAGAAAAGTATTGTACTTCTTGGAAAAAGTGCACAGAGTTTAAAGAGCA
GAACATACTCTTAGATTTTTCCTACTTGCTAGGTTGGGAAAGGAAAGATG
AAGCTTCAAATCTGAGTAACAGGCAAATCATGAAAGACCTGAAGAAGTGC
TTCTTCACAAGTTAAAACATGCATAAGGATTGCTCAGACTGTGTCTTAGA
CTAATTTCAGGGAAAAGCACACGTGAACAATTCAGGGTAGCAGTTGGGAA
TCTAGGAAACAAGGTGCCTGAGCCTCTTATGGAGAGACTACTTGTCCTGG
GTTTTTGNTTTAGTGACACCAGCTAGAGGCCAATGGGAAGAAAAAACTTC
TTCCTTAACTACATCTTAATTACGACCAGCTTGCCTAACCTTACCCCTTT
AAATTTCCCTAACTAACACCTCTCGTCTTTTTAATTTTCTCCTTAACCCC
CCCCGTCGGGGGTTATTTCTTTTTCTTN

NCCGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTTTAAGACTTTTATCA
AGAAGGGGTGTTGGATATTGTTGAATGCTTTCTCAGCATCTAGCGAGATG
ATCATGTGTTTTTTGTCTTTGAGTTTGTTTATATAGTGGATTATGTTGAT
GGATTTCCATATATTGAACTATCCCTGCATTACTTGGATGGAGCCTACTT
GATCATGATGGATGATCATTTTGATGTGTTCTTGGATTCAGTTTGCGAAT
ATTCTATTGCCCACCTTTACTTCTCTGTTTTTTAGGTAGTTCGTTCTCGT
GTTCTCTTCCCCTGTTTGTCTTCTCTGCCCTGCTCTTCCTCCATCGCTCA
CCTGTTTCCTCCTAATATCTGTTACCCCCCCCATCTTCTCTTAGTGTTTG
ATTTTTTCTCTTCCGCCTCCTCTCCCTTCTCCCGCCCGTTTTCATCTTTT
GCTTCTCTCTTTCGTCGACGCACTACGCTCCCCTCCCCATTCGCCTTCCG
CCCTGTCCTGCCATCCTGCCCTCCCCTCTTCTCCTCTCTCTCCTCCTTTC
CTATTTCTTCCTCCTCGCATCTTCTTTCGCCGCCATTTTTTCTCCCTCTT
TCCCCTCCGCCCTCCGCTCCGTTTTCTGTCATATTGCCGATCGCCTATCT
CTCGCTGTATGTCCCATTTTCCTTTCGTATTCTTTTCGTCCCCATCCTTT
TTTCTTTTCTCTTTTCTTCTCTCTCTCTTCATTCTCTGTCTTCTCTCTCT
TTCATCTCTCTTATCATTTTTCCCCCCTTCTCCCC

Query= MSMg01no364_b05.b1 MSMg01no364_b05.b1 CHROMAT_FILE:
MSMg01no364_b05.b1 PHD_FILE: MSMg01no364_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:02 2005
         (506 letters)



>mm_chr10_37970818_37971724
          Length = 907

 Score =  949 bits (491), Expect = 0.0
 Identities = 500/503 (99%), Gaps = 1/503 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcattattacctaaaaataaaaatgaattaaatgaacaattcaaacatgcaattat 64
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 707 gaattcattattacctaaaaataaaaatgaattaaacgaacaattcaaacatgcaattat 648

                                                                       
Query: 65  aaaaaaggtatcttataattaccatgtatttttgttttgaataaattgatgagatatttt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 aaaaaaggtatcttataattaccatgtatttttgttttgaataaattgatgagatatttt 588

                                                                       
Query: 125 ttgtaatatttcatctagaggacagcttttaaccccaaacgtcagctatttctcagaata 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ttgtaatatttcatctagaggacagcttttaaccccaaacgtcagctatttctcagaata 528

                                                                       
Query: 185 gtgacaatgattattgaaagacaaagaagcatcagcatactgaacagaattatgaagata 244
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 527 gtgacaatgattattgaaagacaaagaagcatcagtatactgaacagaattatgaagata 468

                                                                       
Query: 245 agggaga-ttaagaagaaaagtattgtacttcttggaaaaagtgcacagagtttaaagag 303
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 agggagatttaagaagaaaagtattgtacttcttggaaaaagtgcacagagtttaaagag 408

                                                                       
Query: 304 cagaacatactcttagatttttcctacttgctaggttgggaaaggaaagatgaagcttca 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 cagaacatactcttagatttttcctacttgctaggttgggaaaggaaagatgaagcttca 348

                                                                       
Query: 364 aatctgagtaacaggcaaatcatgaaagacctgaagaagtgcttcttcacaagttaaaac 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 aatctgagtaacaggcaaatcatgaaagacctgaagaagtgcttcttcacaagttaaaac 288

                                                                       
Query: 424 atgcataaggattgctcagactgtgtcttagactaatttcagggaaaagcacacgtgaac 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 atgcataaggattgctcagactgtgtcttagactaatttcagggaaaagcacacgtgaac 228

                                  
Query: 484 aattcagggtagcagttgggaat 506
           |||||||||||||||||||||||
Sbjct: 227 aattcagggtagcagttgggaat 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 907
Length adjustment: 10
Effective length of query: 496
Effective length of database: 897
Effective search space:   444912
Effective search space used:   444912
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)