Query= MSMg01no364_m04.b1 MSMg01no364_m04.b1 CHROMAT_FILE:
MSMg01no364_m04.b1 PHD_FILE: MSMg01no364_m04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:59 2005
(327 letters)
>mm_chr10_102941856_102942582
Length = 727
Score = 580 bits (300), Expect = e-170
Identities = 318/324 (98%), Gaps = 1/324 (0%)
Strand = Plus / Minus
Query: 5 gaattcagggaacatttcatatgatactcttaagttgaacttttgggcaatatgacttat 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gaattcagggaacagttcatatgatactcttaagttgaacttttgggcaatatgacttat 426
Query: 65 atccttataagaggaaaactgaatacataaatgagtagcacaaaaaagaacaatataaat 124
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 425 atccttataagaggaaaactggatacataaatgagtagcacaaaaaagaacaatataaat 366
Query: 125 acagatatgattttctttccacaagccaaggaagatgacgttagaaaccttaaacttgtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 acagatatgattttctttccacaagccaaggaagatgacgttagaaaccttaaacttgtc 306
Query: 185 taacactcgaatttagattattgtttatattccagtgaaatagaggtacaaaaacaaatt 244
|||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 305 taacactcaaatttagattattttttatattccagtgaaatagaggtacaaaaacaaatt 246
Query: 245 ccctatctcttgtctgtgataccttgtgaagcacacatgcatgtgcatgtgtg-gtgtgt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 245 ccctatctcttgtctgtgataccttgtgaagcacacatgcatgtgcatgtgtgtgtgtgt 186
Query: 304 gtgtgtatgtgtgtgtgtgtgtgt 327
|||||| |||||||||||||||||
Sbjct: 185 gtgtgtgtgtgtgtgtgtgtgtgt 162
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_m04.g1 MSMg01no364_m04.g1 CHROMAT_FILE:
MSMg01no364_m04.g1 PHD_FILE: MSMg01no364_m04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:00 2005
(503 letters)
>mm_chr10_102785196_102786098
Length = 903
Score = 934 bits (483), Expect = 0.0
Identities = 498/503 (99%)
Strand = Plus / Plus
Query: 1 tatatacttactcaataaatgtgattaaagacgaatgcccacttcactgtcccaccactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatatacttactcaataaatgtgattaaagacgaatgcccacttcactgtcccaccactt 260
Query: 61 tccatacttacccgccaatattgctccctcccaacgtcttcttggataacccaataagtc 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccatacttacccaccaatattgctccctcccaacgtcttcttggataacccaataagtc 320
Query: 121 cagaaatatttcctgtttgttcacaggccatccacatttagacacactcacattggcccc 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagaaatacttcctgtttgttcacaggccatccacatttagacacactcacattggcccc 380
Query: 181 gtcatcagtgaagtatgattccctcttctctcttcactgccaatatctccttgctataag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcatcagtgaagtatgattccctcttctctcttcactgccaatatctccttgctataag 440
Query: 241 gtgggaagaaactgactgcgcagccataaatgaaatgtgtatataagctgaaattttctg 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgggaagaaactgactgcacagccataaatgaaatgtgtatataagctgaaattttctg 500
Query: 301 agtgctcaaattacaagcaaatatcgcctggcataaaaaataagagtttttattaacaat 360
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 501 agtgctcaaattacaagcaaatatcacctagcataaaaaataagagtttttattaacaat 560
Query: 361 ttttaaaatacccaataggattagttgtcaaggaccagccttgtcgtggagatggattct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttaaaatacccaataggattagttgtcaaggaccagccttgtcgtggagatggattct 620
Query: 421 gagagaaggtgtgtttgagaaccatgaaaacaaataactcttcaaattatggcttcaagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagagaaggtgtgtttgagaaccatgaaaacaaataactcttcaaattatggcttcaagc 680
Query: 481 tggtgggcagttttgtttgtttg 503
|||||||||||||||||||||||
Sbjct: 681 tggtgggcagttttgtttgtttg 703
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
