Query= MSMg01no364_m24.b1 MSMg01no364_m24.b1 CHROMAT_FILE:
MSMg01no364_m24.b1 PHD_FILE: MSMg01no364_m24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:04 2005
(333 letters)
>mm_chr10_39237201_39237933
Length = 733
Score = 611 bits (316), Expect = e-179
Identities = 325/328 (99%)
Strand = Plus / Plus
Query: 5 gaattcagagtgtggtgtcaggtgtgacctgggaaaagcccagatgctgccatcaaaggc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagagtgtggtgtcaggtgtgacctgggaaaagcccagatgctgccatcaaaggc 264
Query: 65 agctggagtgtcttaagtgacagtgggaatggagggaggtggctgcagcgttggagagag 124
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agctggagtgtcttaagtgacggtgggaatggagggaggtggctgcagcgttggagagag 324
Query: 125 gggcgtttgcctttgatctcttcccgtttatgattgcttattgttagtttgagtctcaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gggcgtttgcctttgatctcttcccgtttatgattgcttattgttagtttgagtctcaga 384
Query: 185 tgaacgctgcttgtcagagtctattgactgggttttgtgtaaagctccccagtgggtaca 244
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgagcgctgcttgtcagagtctattgactgggttttgtgtaaagctccccagtgggtaca 444
Query: 245 atgtcctttaactgacaaggtcactagaagtttgaaactctgtaggccctaggaagtaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atgtcctttaactgacaaggtcactagaagtttgaaactctgtaggccctaggaagtaag 504
Query: 305 aagtagaggggtagaaaaaggctcatac 332
|||||||||||||||||||||| |||||
Sbjct: 505 aagtagaggggtagaaaaaggcacatac 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_m24.g1 MSMg01no364_m24.g1 CHROMAT_FILE:
MSMg01no364_m24.g1 PHD_FILE: MSMg01no364_m24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:04 2005
(389 letters)
>mm_chr10_39430405_39431192
Length = 788
Score = 714 bits (369), Expect = 0.0
Identities = 384/389 (98%), Gaps = 1/389 (0%)
Strand = Plus / Minus
Query: 1 ctcccagggggcagtgtttggggaatgtgagcagcttgttttcaaaagatgtgtacctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 ctcccagggggcagtgtttggggaatgtgagcagcttgttttcaaaagatgtgtacctta 529
Query: 61 gtctggcccctgttagaaggtattctgttcttttaatttttgtttttcttttatcatgaa 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gtctggcccctgttagaaggtgttctgttcttttaatttttgtttttcttttatcatgaa 469
Query: 121 acaccttttcaagttatttacacttgaaaagatttttaaaaagtaaatgttttaatggga 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 468 acaccttttcaagttatttacacttaaaaagatttttaaaaagtaaatgttttaatggga 409
Query: 181 acattttgcttttataaagaatacttaaaactaattattcatctgtatttttctgaaaat 240
| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 408 a-attttgcttttataaagaaaacttaaaactaattattcatctgtatttttctgaaaat 350
Query: 241 aaacaaacattaattgatatgttatctggaaagaaaataagacaaaaaatgtctttgcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aaacaaacattaattgatatgttatctggaaagaaaataagacaaaaaatgtctttgcct 290
Query: 301 ctaatattgtaaaataagacaatattctctgttggcatcttctaaggaattaccagtttc 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ctaatattataaaataagacaatattctctgttggcatcttctaaggaattaccagtttc 230
Query: 361 atgtataacaacttaaatgcattctttaa 389
|||||||||||||||||||||||||||||
Sbjct: 229 atgtataacaacttaaatgcattctttaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 788
Length adjustment: 9
Effective length of query: 380
Effective length of database: 779
Effective search space: 296020
Effective search space used: 296020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
