Query= MSMg01no364_o07.b1 MSMg01no364_o07.b1 CHROMAT_FILE:
MSMg01no364_o07.b1 PHD_FILE: MSMg01no364_o07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:11 2005
(501 letters)
>mm_chr10_8922222_8923122
Length = 901
Score = 920 bits (476), Expect = 0.0
Identities = 491/496 (98%)
Strand = Plus / Minus
Query: 5 gaattctgcaaacttccctgcagattccactgactcatcaaagacctcctgagtgcctgg 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 gaattctgcaaacatccctgcagattccactgactcatcaaagacctcctgagtgcctgg 641
Query: 65 ccagcccagttctttctaactgggctgctgtttaaaagaggcctgtgtgtccactggaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ccagcccagttctttctaactgggctgctgtttaaaagaggcctgtgtgtccactggaga 581
Query: 125 ctaacacaaagcgatccccatgctgtctccctgaagccttacttgaacttgaagacaaga 184
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ctaacacaaagctatccccatgctgtctccctgaagccttacttgaacttgaagacaaga 521
Query: 185 ccaatgaaaaagctcttccctggctctttggatcatctacgcaatgatgcccttcgtgct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 520 ccaatgaaaaagctcttccctggctctttggatcatctacgcaatgatgcccttcatgct 461
Query: 245 tgctacctgcaacttgctttcctctccttctttaactgctttgaatagcaagccctctgc 304
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 460 tgctacctgcaacttgctttcctctccttctggaactgctttgaatagcaagccctctgc 401
Query: 305 cacaggcatctccatgaggttaagacagggtaacctgcttaacaagtatttcattagaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cacaggcatctccatgaggttaagacagggtaacctgcttaacaagtatttcattagaga 341
Query: 365 gaattgaaaaggtagactgagaaattccaggaaaagtttgttatacgatttttaaatgct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gaattgaaaaggtagactgagaaattccaggaaaagtttgttatacgatttttaaatgct 281
Query: 425 ttagaataaggccacaataccccgctttaaaaaagatcggtcctttgtggatgatgttat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ttagaataaggccacaataccccgctttaaaaaagatcggtcctttgtggatgatgttat 221
Query: 485 tagtgaagtccttgaa 500
||||||||||||||||
Sbjct: 220 tagtgaagtccttgaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_o07.g1 MSMg01no364_o07.g1 CHROMAT_FILE:
MSMg01no364_o07.g1 PHD_FILE: MSMg01no364_o07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:11 2005
(490 letters)
>mm_chr10_8876098_8876987
Length = 890
Score = 835 bits (432), Expect = 0.0
Identities = 478/496 (96%), Gaps = 8/496 (1%)
Strand = Plus / Plus
Query: 1 tttcttttcatatttctttctatgagttgtcttaagagccatacaatcattttcaagttg 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 tttcttttcatatttctttctatgagttgtcttaagatccatacaatcattttcaagttg 260
Query: 61 atgcttatttagctgggtcatcatattaaaataatcacaactttcagaaatttgctcctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgcttatttagctgggtcatcatattaaaataatcacaactttcagaaatttgctcctg 320
Query: 121 aacttattttgtgggattagatcttagatgtatgtgaatatgaattctataagaactgga 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacttattttatgggattagatcttagatgtatgtgaatatgaattctataagaactgga 380
Query: 181 gataatattttattcttttagttctaatgattgt---aaaagaaggatttattttataaa 237
|||||| ||||||||||||||||||||||||||| |||| |||| |||||||||||||
Sbjct: 381 gataatgttttattcttttagttctaatgattgtaaaaaaaaaagggtttattttataaa 440
Query: 238 tatgtgttttttgcttgtgtgtatgtttgtgcaccacatgtgtgctcatggaagctagaa 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatgtgttttttgcttgtgtgtatgtttgtgcaccacatgtgtgctcatggaagctagaa 500
Query: 298 gagggcatgggattgcctagaacaggagttgtagatggttgtgagccaccttatgtggat 357
|||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 501 gagggcataggattgactagaacaggagttgcagatggttgtgagccaccttatgtggat 560
Query: 358 gctggggatagaaccctggtcctctggaagagcacctagtgtccttaatcactgagccac 417
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 561 gctggggatagaaccctagtcctctggaagagcacctaatgtccttaatcactgagccac 620
Query: 418 ctcctcagaccttaatcgtctggaattttaataagcaaaacttctttcta--tataatgt 475
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 621 ctcctcagaccttaatcgtctggaattttaataagcaaaacttct--ctacatataatgt 678
Query: 476 ttaata-tataagtta 490
|||||| |||||||||
Sbjct: 679 ttaataatataagtta 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space: 422400
Effective search space used: 422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
