Query= MSMg01no365_e17.b1 MSMg01no365_e17.b1 CHROMAT_FILE:
MSMg01no365_e17.b1 PHD_FILE: MSMg01no365_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:45 2005
(492 letters)
>mm_chr10_57162731_57163622
Length = 892
Score = 799 bits (413), Expect = 0.0
Identities = 472/493 (95%), Gaps = 6/493 (1%)
Strand = Plus / Minus
Query: 3 cggaattcactgatatcc--acaaagcttgaacaatggtgtttcaaaaatttctcctcaa 60
|||| |||||||||| | ||| ||||||||||||||||||||||||| ||| ||||||
Sbjct: 692 cggagttcactgata--ctgacagagcttgaacaatggtgtttcaaaaacttcccctcaa 635
Query: 61 atttaaattttcaaaaactgggaatttactctattttctagctaaaaatgaggtccctag 120
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 atttaaattttaaaaaactgggaatttactctattttctagctaaaaatgaggtccctaa 575
Query: 121 tttcaagggagctagcatctaattgggaactgcagtatgagctcagcgctctacaacaag 180
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 574 tttcaagggagctagcatcaaattgggaactgcagtatgagctcagtgctctacaacaag 515
Query: 181 aataccaggatgcaaagtatatatgtaaattattggtctagttctcctgtgtcctaatca 240
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct: 514 aataccaggatgcaaagtatgtatgtaaattattggtctagtgctcctgtgtcctaatca 455
Query: 241 tttagagttttacacagagggccagatgatgcttgtatatacagtaggtgttgttacaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tttagagttttacacagagggccagatgatgcttgtatatacagtaggtgttgttacaga 395
Query: 301 gttttaagcgtgatggtcctgtctcccttaagatgcatgtgacccggtgacttacagtgt 360
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gttttaagcgtgacagtcctgtctcccttaagatgcatgtgacccggtgacttacagtgt 335
Query: 361 cagacactcaatagccatcaaaattcaactcaagatagtggctctcaagtttgtggtttt 420
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 334 cagacactcaatatccatcaaaattcatctcaagatagtggctctcaagtttgtggtttt 275
Query: 421 actctg-ctgaagattgaaaatacagacatcacagagaacagacagtgaatgtaaacatt 479
|||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 274 actctgac-gaagattgaaaatacagacatcagagagaacagacagtgaatgtaaacatt 216
Query: 480 aggaggagatgtt 492
|||||||||||||
Sbjct: 215 aggaggagatgtt 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space: 425124
Effective search space used: 425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no365_e17.g1 MSMg01no365_e17.g1 CHROMAT_FILE:
MSMg01no365_e17.g1 PHD_FILE: MSMg01no365_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:45 2005
(441 letters)
>mm_chr10_57679395_57680235
Length = 841
Score = 563 bits (291), Expect = e-164
Identities = 300/303 (99%), Gaps = 2/303 (0%)
Strand = Plus / Minus
Query: 1 tggggatgtgccaaccaggagaagaaatcaaagaagaagaatgcaatataggtagcaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tggggatgtgccaaccaggagaagaaatcaaagaagaagaatgcaatataggtagcaact 244
Query: 61 aaactaatgtcttttaccactttatttatccatgccattgggtgttgacattcactgtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aaactaatgtcttttaccactttatttatccatgccattgggtgttgacattcactgtca 184
Query: 121 aagtctctgaattcaaaatggtctgagagaaatacatctaggtatctctgtgagtacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 aagtctctgaattcaaaatggtctgagagaaatacatctaggtatctctgtgagtacatt 124
Query: 181 tcccaaaataattaactataaaagacccaccatgaagtgtgtggcataatcataagaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tcccaaaataattaactataaaagacccaccatgaagtgtgtggcataatcataagaaat 64
Query: 241 gaggacctactccgaataaaatggga-ttaaaaaa-gacagatatgtaacagttactttc 298
||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 63 gaggacctagtccgaataaaatgggaattaaaaaaagacagatatgtaacagttactttc 4
Query: 299 ttc 301
|||
Sbjct: 3 ttc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
