Query= MSMg01no365_e23.b1 MSMg01no365_e23.b1 CHROMAT_FILE:
MSMg01no365_e23.b1 PHD_FILE: MSMg01no365_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:46 2005
(389 letters)
>mm_chr10_19121043_19121827
Length = 785
Score = 725 bits (375), Expect = 0.0
Identities = 384/389 (98%), Gaps = 4/389 (1%)
Strand = Plus / Plus
Query: 1 catgacaggaggtctccctacaaacagaaaagagaggctatggcttattaatcaaaccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgacaggaggtctccctacaaacagaaaagagaggctatggcttattaatcaaaccag 260
Query: 61 aaactggatgtgaccatccttcctcattgctatggtttcttactgctgtgactgaattga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaactggatgtgaccatccttcctcattgctatggtttcttactgctgtgactgaattga 320
Query: 121 ggaataatttctgagagagctcgccatctatatattcttatcccacagtgtatccacaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaataatttctgagagagctcgccatctatatattcttatcccacagtgtatccacaca 380
Query: 181 gttctacttgttatctattaatgtgcttctcagattaaatgtctcacttgattcaattgc 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 gttctacttgttatctattaatgtgtttctcagattaaatgtctcacttgattcaattgc 440
Query: 241 atttcagcagtgatatattggagattgtcttaattaaatctttgattttttctttacctt 300
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 atttcagcagtgatatattggagattgtcttaa----atctttgattttttctttacctt 496
Query: 301 atttattctaattaccttccactttaagatttagtttttgcacattgtgggccaaaaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 atttattctaattaccttccactttaagatttagtttttgcacattgtgggccaaaaata 556
Query: 361 agaaaaacaaaacaacaaccagaaatccc 389
|||||||||||||||||||||||||||||
Sbjct: 557 agaaaaacaaaacaacaaccagaaatccc 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 785
Length adjustment: 9
Effective length of query: 380
Effective length of database: 776
Effective search space: 294880
Effective search space used: 294880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no365_e23.g1 MSMg01no365_e23.g1 CHROMAT_FILE:
MSMg01no365_e23.g1 PHD_FILE: MSMg01no365_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:46 2005
(412 letters)
>mm_chr10_19305517_19306328
Length = 812
Score = 739 bits (382), Expect = 0.0
Identities = 385/386 (99%)
Strand = Plus / Minus
Query: 27 tcagaagctgagaagtcagtttaaatcagtcagcttggagaggagttttgagatagaaca 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 tcagaagctgagaagtcagtttaaatcagtcagcttggagaggagttttgagatagaaca 753
Query: 87 gctgagttgaactggacaaccagagttcagaaaggactagaaggatgagcgtattcacca 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gctgagttgaactggacaaccagagttcagaaaggactagaaggatgagcgtattcacca 693
Query: 147 gtaagtctgagatgacaattacatctagagaataaaaataacatgtacacacacacacac 206
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 692 gtaagtctgagatgacaattacatctagaaaataaaaataacatgtacacacacacacac 633
Query: 207 acacacacacacaccacacaactggaagattgtggtactgcaatcccaagtcatgactgt 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 acacacacacacaccacacaactggaagattgtggtactgcaatcccaagtcatgactgt 573
Query: 267 cagtactgagctattgagctagtgaaccaatgtctacgactatttacctccgtgtgtttc 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 cagtactgagctattgagctagtgaaccaatgtctacgactatttacctccgtgtgtttc 513
Query: 327 ccatggagagaaaaatggatgcgtattggttgaaaccattgtcaagttggttttctgttc 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ccatggagagaaaaatggatgcgtattggttgaaaccattgtcaagttggttttctgttc 453
Query: 387 attgtgctgaatttttatcactcagt 412
||||||||||||||||||||||||||
Sbjct: 452 attgtgctgaatttttatcactcagt 427
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
