Query= MSMg01no365_l24.b1 MSMg01no365_l24.b1 CHROMAT_FILE:
MSMg01no365_l24.b1 PHD_FILE: MSMg01no365_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:20 2005
(393 letters)
>mm_chr10_118040134_118040926
Length = 793
Score = 704 bits (364), Expect = 0.0
Identities = 383/391 (97%), Gaps = 4/391 (1%)
Strand = Plus / Plus
Query: 5 gaattccagggtcatttc--ggcactcagattgaacataaagaatcctctcatttcaaaa 62
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagggtcaa--caaggcactcagattgaacataaagaatcctctcatttcaaaa 262
Query: 63 acccatttaattgaaatgagttctcttctctgatattgaggctatgtccaaaactatcaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 acccatttaattgaaatgagttctcttctctgatattgaggctatgtccaaaactatcaa 322
Query: 123 ctatattctcatgtcttaaaatatcagaacaaggagaacaggatttgaaaccctacgggg 182
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 323 ctatattctcacgtcttaaaatatcagaacaaagagaacaggatttgaaaccctacgggg 382
Query: 183 gagcatttcatatgttcattttttaaaaccttgttggtgttttttacaacttccttaccc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gagcatttcatatgttcattttttaaaaccttgttggtgttttttacaacttccttaccc 442
Query: 243 tcttaagaatgtaaaagaaggattggtcagctaaagaaatatagacactgttctttttct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcttaagaatgtaaaagaaggattggtcagctaaagaaatatagacactgttctttttct 502
Query: 303 tgagctttgaccacacattttactttggtgacaacccagcccctctttttcttctcatca 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tgagctttgaccacacattttactttggtgacaacccagcccctctttttcttctcatca 562
Query: 363 ttttanagacattgtaatttacttatgttta 393
||||| |||||||||||||||||||||||||
Sbjct: 563 ttttaaagacattgtaatttacttatgttta 593
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space: 301056
Effective search space used: 301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no365_l24.g1 MSMg01no365_l24.g1 CHROMAT_FILE:
MSMg01no365_l24.g1 PHD_FILE: MSMg01no365_l24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:20 2005
(420 letters)
>mm_chr10_118193601_118194420
Length = 820
Score = 804 bits (416), Expect = 0.0
Identities = 419/420 (99%)
Strand = Plus / Minus
Query: 1 cttcgatggaaaccagcaccacttttacagagttgaacacagcttgcatgacataagtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cttcgatggaaaccagcaccacttttacagagttgaacacagcttgcatgacataagtaa 561
Query: 61 aaggagctatattcccttctcttgtgatggggagactattagattaaatggtggcctgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaggagctatattcccttctcttgtgatggggagactattagattaaatggtggcctgag 501
Query: 121 gccttagataagatggaagggtttgtcacagtggagggggaaattttgtcatatattttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gccttagataagatggaagggtttgtcacagtggagggggaaattttgtcatatattttt 441
Query: 181 catatgtataatattaatgaagaacttctagaactcagttagcacttagacaagatgaga 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 catatgtatgatattaatgaagaacttctagaactcagttagcacttagacaagatgaga 381
Query: 241 acaattaccctgggtacaggcttgggaaatttcagagagcccagagaggctgattcaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acaattaccctgggtacaggcttgggaaatttcagagagcccagagaggctgattcaaag 321
Query: 301 agctccgagcactggattctaagcagcagacatagctatcactgctgtggggcacgcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agctccgagcactggattctaagcagcagacatagctatcactgctgtggggcacgcaaa 261
Query: 361 gcctacctttccctttggttgcccactcttggatccaggccaaaccttcattattccact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gcctacctttccctttggttgcccactcttggatccaggccaaaccttcattattccact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
