Query= MSMg01no366_c12.b1 MSMg01no366_c12.b1 CHROMAT_FILE:
MSMg01no366_c12.b1 PHD_FILE: MSMg01no366_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:54 2005
(504 letters)
>mm_chr10_53698271_53699174
Length = 904
Score = 938 bits (485), Expect = 0.0
Identities = 494/497 (99%)
Strand = Plus / Plus
Query: 8 gaattccaggctgtcttctatggtaaggatttatgctaccactgcccggccatctgtgga 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattccaggctgtcttctatggtaaggatttatgctaccactgcccggccatctgtgga 267
Query: 68 ctttctggttttcacccaacttttaaaactgttaattaactccttttcaagacagttaca 127
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ctttctggtcttcacccaacttttaaaactgttaattaactccttttcaagacagttaca 327
Query: 128 taagacagaagtcaaactatgcaattaaaacaccatcttggatataagcatatggtgtgt 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 taagacagaagtcaaactatgcaattaaaacaccatcttggatataagcatatggtgtgt 387
Query: 188 gagctaaaggctcaggctttgaaggcacaatgcctgtgtttgaatctctgctgtactgct 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gagctaaaggctcaggctttgaaggcacaatgcctgtgtttgaatctctgctgtactgct 447
Query: 248 tcaagttgatccatcttggccccccctctgagcctaggatttcttgcctagaaaatgcag 307
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 448 tcaagttgatccatcttggccccctctctgagcctaggatttcttgcctagaaaatgcag 507
Query: 308 ataacagtagcatttgcttttggaaagctgtggaaagacatacacaagttattatactta 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ataacagtagcatttgcttttggaaagctgtggaaagacatacacaagttattatactta 567
Query: 368 tgagtcttagattcaacagtgctcactctataggctaggtgtagttttatgatcataata 427
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tgagccttagattcaacagtgctcactctataggctaggtgtagttttatgatcataata 627
Query: 428 acatatatcctcaaggaggtaccctagttcctgtttgaggctgaaaatttttctttagac 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 acatatatcctcaaggaggtaccctagttcctgtttgaggctgaaaatttttctttagac 687
Query: 488 aattttgctctggtcag 504
|||||||||||||||||
Sbjct: 688 aattttgctctggtcag 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_c12.g1 MSMg01no366_c12.g1 CHROMAT_FILE:
MSMg01no366_c12.g1 PHD_FILE: MSMg01no366_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:55 2005
(512 letters)
>mm_chr10_53886911_53887822
Length = 912
Score = 882 bits (456), Expect = 0.0
Identities = 498/512 (97%), Gaps = 1/512 (0%)
Strand = Plus / Minus
Query: 1 caatttatcaatctccacgtgtgggctattgcctttgtgtccttaagatttctgtctatt 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 caatatatcaatctccacgtgtgggctattgcctttgtgtccttaagatttctgtctatt 678
Query: 61 ccacaatcatgaacattgtccagtgctctctcctgtgtgttccgtggctttactgtttta 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 677 ccacaatcatgaacattgtccagtgttctctcctgtgtgttccgtggctttactgtttta 618
Query: 121 ctgtttacaccaatattacaatccgcctagacctgctatttctatgtctcataacaatgg 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 617 ctgtttacaccaatattacaatctgcctagacctgctatttctatgtctcataacaatgg 558
Query: 181 ggtcaaatccattttcctcatagatatatccaaatgaaacatgccacacaatggttactt 240
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 557 ggtcaaatccattttccacatagagatatccaaatgaaacatgccacacaatggttactt 498
Query: 241 ttctgtttttcacagttaagcttgtcttatgtcaggtgaccacatactgatcaggccatt 300
|| |||||||||||||||| ||||||| |||||||||||||| ||||| ||||||||||
Sbjct: 497 ttttgtttttcacagttaaatttgtcttgtgtcaggtgaccacgtactggtcaggccatt 438
Query: 301 tctttctttttttttaataaattaatttatttttttacactcctgatcccattcctcacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tctttctttttttttaataaattaatttatttttttacactcctgatcccattcctcacc 378
Query: 361 ctacccctgatccaccttccaaatgctccacatcccacacctcctccccaagcccctgtc 420
||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 377 cta-ccctgatccaccttccaaatgccccacatcccacacctcctccccaagcccctgtc 319
Query: 421 tccaagtggatgctcccaagccccaccccctgacctgtaaactccctggggcctccagtc 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 318 tccaagtggatgctcccaagccccaccccatgacctgtaaactccctggggcctccagtc 259
Query: 481 tcttgagggttaggtgtatcatctctgaaaga 512
||||||||||||||||||||||||||||||||
Sbjct: 258 tcttgagggttaggtgtatcatctctgaaaga 227
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
