Query= MSMg01no366_d05.b1 MSMg01no366_d05.b1 CHROMAT_FILE:
MSMg01no366_d05.b1 PHD_FILE: MSMg01no366_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:58 2005
(448 letters)
>mm_chr10_20006007_20006855
Length = 849
Score = 806 bits (417), Expect = 0.0
Identities = 441/449 (98%), Gaps = 1/449 (0%)
Strand = Plus / Minus
Query: 1 gagctatgtctccatggtaacagcagggagaagaaaatgggaaaacaagctaatatttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gagctatgtctccatggtaacagcagggagaagaaaatgggaaaacaagctaatatttat 432
Query: 61 agcccatgaccgctgatgttgtgctggcttcggtcgttatgctatcgcagggctaaggta 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 agcccatgtccgctgatgttgtgctggcttcggtcgttatgctatcgcagggctaaggta 372
Query: 121 ggaacgacatctgtctctcctggtgctttagttctg-tttttatgcatactccctccagc 179
|||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 371 ggaacgacatctgtctctcctggtgctttagttctgttttttttgcattctccctccagc 312
Query: 180 atgggtagtgctagttacagcgctttgctgcactgtccttcggctgtgtctggtaaaaga 239
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 311 atgggtagtgctagttacagcgctttgccgcactgtccttcggctgtgtctggtaaaaga 252
Query: 240 aacagattccagagcctgctccagcgctgacctcacgtggttatccaaagtcctcagttt 299
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aacagattccagagccagctccagcgctgacctcacgtggttatccaaagtcctcagttt 192
Query: 300 cttcatctctgagtaatgcctacctttaccaggttttgggaggattcaatcaagtcgtgt 359
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 191 cttcatctctgagtaatgcctacctttaccaggttttgggaggattcaatcaggtcgtgt 132
Query: 360 ccccctcaccccccttgcccagagaggtggccattgttatgcatattgctgctgatgctg 419
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 cccccccaccccccttgcccagagaggtggccattgttatgcatattgctgctgatgctg 72
Query: 420 cttaaatgtaatcattcttgttttgattg 448
|||||||||||||||||||||||||||||
Sbjct: 71 cttaaatgtaatcattcttgttttgattg 43
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 849
Length adjustment: 10
Effective length of query: 438
Effective length of database: 839
Effective search space: 367482
Effective search space used: 367482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_d05.g1 MSMg01no366_d05.g1 CHROMAT_FILE:
MSMg01no366_d05.g1 PHD_FILE: MSMg01no366_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:58 2005
(326 letters)
>mm_chr10_19843607_19844332
Length = 726
Score = 609 bits (315), Expect = e-179
Identities = 325/331 (98%), Gaps = 5/331 (1%)
Strand = Plus / Plus
Query: 1 taatgatgggaattttattggcctggtggagaaacttaattttaataatacagttagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 taatgatgggaattttattggcctggtggagaaacttaattttaataatacagttagaaa 255
Query: 61 atgcagtatgaattagaaattagcttaataaaaattcttgaagtttaatgaggattaggt 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 atgcagtatgaactagaaattagcttaataaaaattcttgaagtttaatgaggattaggt 315
Query: 121 tttctttacaggctcagtgtgccttgctcacattaaaataaaataaaataaaataaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tttctttacaggctcagtgtgccttgctcacattaaaataaaataaaataaaataaaata 375
Query: 181 aaataaaa-----atcactttgaaagagaggtctatttaaatatgtgaacgtttccttgg 235
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aaataaaataaaaatcactttgaaagagaggtctatttaaatatgtgaacgtttccttgg 435
Query: 236 tttgttttttataactgattacccagttgttgttaaggtggggttccaatggtggtgtct 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tttgttttttataactgattacccagttgttgttaaggtggggttccaatggtggtgtct 495
Query: 296 aacctggccccttttacgacagggagttgac 326
|||||||||||||||||||||||||||||||
Sbjct: 496 aacctggccccttttacgacagggagttgac 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
