Query= MSMg01no366_g04.b1 MSMg01no366_g04.b1 CHROMAT_FILE:
MSMg01no366_g04.b1 PHD_FILE: MSMg01no366_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:13 2005
(289 letters)
>mm_chr10_10724624_10725312
Length = 689
Score = 503 bits (260), Expect = e-147
Identities = 279/286 (97%), Gaps = 2/286 (0%)
Strand = Plus / Plus
Query: 6 ggaattctcttcaggttttctcaccagcatttacttgttccatagctgctctctaccctg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattctcttcaggttttctcaccagcatttacttgttccatagctgctctctaccctg 265
Query: 66 tactagcaaatgctatcttacatatttatacacttgttctagtcacaaaactaaaattat 125
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 266 tactagcaaatgctatcttacatatttatacacttgttttagtcataaaactaaaattat 325
Query: 126 tctactgaaatttttgcatcaccaaaaggcaaactaatttagtcaaaatataaatttaag 185
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 326 tctactgaaatttttgcatcaccaaaaggcaaactaatttcgtcaaaatataaatttaag 385
Query: 186 gtaacatagctatgtattatgtgtatgtgtgcataagtatatacacatgtccatgtggtg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gtaacatagctatgtattatgtgtatgtgtgcataagtatatacacatgtccatgtggtg 445
Query: 246 tgtgcttgagtgtgcgtgtgtgtg--tgtgtgtgtgtgtgtgtgtg 289
||||||||||||||| || ||||| ||||||||||||||||||||
Sbjct: 446 tgtgcttgagtgtgcttgagtgtgcttgtgtgtgtgtgtgtgtgtg 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no366_g04.g1 MSMg01no366_g04.g1 CHROMAT_FILE:
MSMg01no366_g04.g1 PHD_FILE: MSMg01no366_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:13 2005
(528 letters)
>mm_chr10_10933564_10934491
Length = 928
Score = 998 bits (516), Expect = 0.0
Identities = 525/528 (99%)
Strand = Plus / Minus
Query: 1 ttcacagaagagagagtttaaccacttacagtttatgcatgtgtgaacacagcgttctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 ttcacagaagagagagtttaaccacttacagtttatgcatgtgtgaacacagcgttctct 669
Query: 61 tgtagtagatcaaacactagttagtttctaaggacagagtaactgaaatgaataaactct 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 668 tgtagtagatcaaacactagttagtttctaagaacagagtaactgaaatgaataaactct 609
Query: 121 attgtaggtttagataactagtggctaaaatgactagttacaggaacacaagaaatgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 attgtaggtttagataactagtggctaaaatgactagttacaggaacacaagaaatgaat 549
Query: 181 tcagtacaatgatgatttttaaaaagccgtatttacagatacatcatcttaaaacacaca 240
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 548 tcagtacaatgatgatttttaaaaagccatatttacagatacatcatcttaaaacacata 489
Query: 241 cacaaaaaaaacttactaaaaaggttaaagagatcattgtaggtaaatgttaatccactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cacaaaaaaaacttactaaaaaggttaaagagatcattgtaggtaaatgttaatccactt 429
Query: 301 aaaaatattaacaatgataccacttaaacataatagaaaaatgaatttttcagtatttta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 aaaaatattaacaatgataccacttaaacataatagaaaaatgaatttttcagtatttta 369
Query: 361 acatttagtaacaaaacacaatataaccacctagtgatttattattaggagctaatgaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 acatttagtaacaaaacacaatataaccacctagtgatttattattaggagctaatgaca 309
Query: 421 gtgttacagtttaaactcatgcaaataactacttattatatagtttagcattttcttaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gtgttacagtttaaactcatgcaaataactacttattatatagtttagcattttcttaaa 249
Query: 481 acattactgagaatataatggtgaatcctatgctaaagatgctgaagg 528
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 acattactgagaatataatggtgaatcctatgctaaagatgctgaagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
