Query= MSMg01no366_n12.b1 MSMg01no366_n12.b1 CHROMAT_FILE:
MSMg01no366_n12.b1 PHD_FILE: MSMg01no366_n12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:48 2005
(510 letters)
>mm_chr10_3818069_3818977
Length = 909
Score = 963 bits (498), Expect = 0.0
Identities = 507/510 (99%), Gaps = 1/510 (0%)
Strand = Plus / Plus
Query: 1 catgcacaacatctgcagagatttgggccatatggaattccaccatcaatagaaggaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgcacaacatctgcagagatttgggccatatggaattccaccatcaatagaaggaagt 260
Query: 61 ggacacagcatcccatccttatccaacaaactctctgtagctgacagcagttggcaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggacacagcatcccatccttatccaacaaactctctgtagctgacagcagttggcaaaag 320
Query: 121 gaaagctagttttctccagtggagggccactgggtttatcacactctccaggccccattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaagctagttttctccagtggagggccactgggtttatcacactctccaggccccattc 380
Query: 181 tcaggaggagttggccaacacaaaaagtgatacctaactaagagtcaccctttaaacgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaggaggagttggccaacacaaaaagtgatacctaactaagagtcaccctttaaacgac 440
Query: 241 ttttcgtttttttctaaaacatatgtgtgtctcctaaagctgagttaaaaaggggcctag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttcgtttttttctaaaacatatgtgtgtctcctaaagctgagttaaaaaggggcctag 500
Query: 301 acatattgccctggtgcctgtacctccagccccatcaataaccaccacgaaacaaccatg 360
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 501 acatattgccctggtgcctgtacctccagccccatcaataaccagcatgaaacaaccatg 560
Query: 361 cactctctagtagctcaaacctcaagcaattttgtgtcctatgacactccacttcttttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cactctctagtagctcaaacctcaagcaattttgtgtcctatgacactccacttcttttt 620
Query: 421 aatgactcctagtcttggatcaacctctttttctttcctggaacaccatcaccctctcta 480
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 621 aatgactcctagtcttggatcaacctctttttctttcctgga-caccatcaccctctcta 679
Query: 481 gttacctcagcacatcctcccttccttcag 510
||||||||||||||||||||||||||||||
Sbjct: 680 gttacctcagcacatcctcccttccttcag 709
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 909
Length adjustment: 10
Effective length of query: 500
Effective length of database: 899
Effective search space: 449500
Effective search space used: 449500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_n12.g1 MSMg01no366_n12.g1 CHROMAT_FILE:
MSMg01no366_n12.g1 PHD_FILE: MSMg01no366_n12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:48 2005
(240 letters)
>mm_chr10_3986807_3987446
Length = 640
Score = 426 bits (220), Expect = e-124
Identities = 235/240 (97%)
Strand = Plus / Minus
Query: 1 atttaacacttttgaaaagtctcatgttctaagaaatgaactattgcctggattcttggt 60
|||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 440 atttaacagttttgaaaagtctcatgttctaagaaatgaactattgtttggattcttggt 381
Query: 61 tgttaatattttgttaagaaagttgtgtctctgttgacgtgtagctttcttctcccatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgttaatattttgttaagaaagttgtgtctctgttgacgtgtagctttcttctcccatat 321
Query: 121 gttttttataatacctctaggtttagagaacttgagccttagaatgaattgcttctattt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 320 gttttttataatacctctaggtttagagaacttgagccttagaatgaattgcaactattt 261
Query: 181 cggaatggagttgtagttaaatagcatttcttcttttacttttcagtagaattctctgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cggaatggagttgtagttaaatagcatttcttcttttacttttcagtagaattctctgat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
