Query= MSMg01no367_h03.b1 MSMg01no367_h03.b1 CHROMAT_FILE:
MSMg01no367_h03.b1 PHD_FILE: MSMg01no367_h03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:37 2005
(427 letters)
>mm_chr10_111274672_111275498
Length = 827
Score = 750 bits (388), Expect = 0.0
Identities = 403/408 (98%), Gaps = 1/408 (0%)
Strand = Plus / Minus
Query: 21 aagcaaaaacatcttaagaga-ttttttttcagatgtttgattaaggaaattatatggag 79
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 827 aagcaaaaacatcttaagagatttttttttcagatgtttgattaaggaaattatatggaa 768
Query: 80 ccatttgaaatggccatgatagggtttatatcaacattacaatgtatgcacagggccagc 139
||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 ccacttgaaatggccacgatagggtttatatcaacattacaatgtatgcacagggccagc 708
Query: 140 aggatggctcgggctgtacagacctgactgctagaggctaaacttgacacctagatccca 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 aggatggctcgggctgtacagacctgactgctagaggctaaacttgacacctagatccca 648
Query: 200 ggtaaaagtggaagaagagagccagaccctcaaggttgtcttctgacttccatatgcgtg 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 ggtaaaagtggaagaagagagccagaccctcaaggttgtcttctgacttccatatgcgtg 588
Query: 260 ctgttgtcatgtacatcacatggcttaagtttttaagtgtttaaaagtcgatggtgtgat 319
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 587 ctgttgtcatgtacatcacatggcttaagtttttaagtgtttaaaagtcgatggtgcgat 528
Query: 320 gtcaattgcaaaagaagtaaacagtgaaattgaaatgtatgtgtatgtattctctgctct 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gtcaattgcaaaagaagtaaacagtgaaattgaaatgtatgtgtatgtattctctgctct 468
Query: 380 gagtgggaggaggaaaggcaaggagagagggaggaagggaaagaggaa 427
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gagtgggaggaggaaaggcaaggagagagggaggaagggaaagaggaa 420
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_h03.g1 MSMg01no367_h03.g1 CHROMAT_FILE:
MSMg01no367_h03.g1 PHD_FILE: MSMg01no367_h03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:37 2005
(494 letters)
>mm_chr10_111210525_111211419
Length = 895
Score = 903 bits (467), Expect = 0.0
Identities = 488/495 (98%), Gaps = 2/495 (0%)
Strand = Plus / Plus
Query: 1 tttgtttagctctgagccccatttttttaatggggttatttgattttctggagtccacct 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tttgtttagctctgagcccca-ttttttaatggggttatttgattttctggagtccacct 260
Query: 61 tcttgagttctttatatatattggatattagtcctctatctgatttcggataggtaaaga 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttgagttctttatatatattgaatattagtcctctatctgatttcggataggtaaaga 320
Query: 121 ttctttcccaatctgttggtggcctttttgtcttattgacagtgtcttttgccttacaga 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 ttctttcccaatctgttggtggcctttttgtcttattgaccgtgtcttttgccttacaga 380
Query: 181 agctttgcagtttcatgaggtcccatttctcaattttcggtcttacagcacaagccattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agctttgcagtttcatgaggtcccatttctcaattttcggtcttacagcacaagccattg 440
Query: 241 ctgttctattcagaaaattttcccctgtgcccatatcttcgaggcttttccccactttct 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 ctgttctattcagaaaaatttcccctgtgcccatatcttcgaggcttttccccacttcct 500
Query: 301 cctctataagtttcattgtctctggttttatgtggaagagcgggacttttaaaagccaag 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctctataagtttcagtgtctctggttttatgtggaagagcgggacttttaaaagccaag 560
Query: 361 tccttctgatgcgtgcagcatctgcttatgacaaataaatttcaaaagcaggaagcaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccttctgatgcgtgcagcatctgcttatgacaaataaatttcaaaagcaggaagcaaag 620
Query: 421 ctgtgtatacttgactcaggagaaaaaaaa-tcacatttcaccacgatattggatggtat 479
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 621 ctgtgtatacttgactcaggagaaaaaaaaatcacatttcaccacgatattggatggtat 680
Query: 480 cagtatgcttctatg 494
|||||||||||||||
Sbjct: 681 cagtatgcttctatg 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 895
Length adjustment: 10
Effective length of query: 484
Effective length of database: 885
Effective search space: 428340
Effective search space used: 428340
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
