Query= MSMg01no367_k18.b1 MSMg01no367_k18.b1 CHROMAT_FILE:
MSMg01no367_k18.b1 PHD_FILE: MSMg01no367_k18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:54 2005
(514 letters)
>mm_chr10_66146832_66147745
Length = 914
Score = 832 bits (430), Expect = 0.0
Identities = 442/446 (99%)
Strand = Plus / Minus
Query: 69 gaaaaatgtgaccttggtccttcagtgacaaggaacaggatccagctatgaacctgacca 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 gaaaaatgtgaccttggtccttcagtgacaaggaacaggatccagctatgaacctgacca 855
Query: 129 tgaggacttaagctttgtggtacccaggactgggggcctgtctgcttgcaagaggcctcc 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 tgaggacttaagctttgtggtacccaggactgggggcctgtctgcttgcaagaggcctcc 795
Query: 189 tgacccctggaagccgagatattgcctgtcgcaagtcttttagtttgtgctgattcatta 248
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 tgacccctggaagccgtgatattgcctgtcgcaagtcttttagtttgtgctgattcatta 735
Query: 249 cgtagcaattaaaaaataattggtcacatgtccggtgccataggaagacactcgggcatt 308
||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 734 cgtagcaattaaaaaataattggtcacatgttcggtgccataggaagacaatcgggcatt 675
Query: 309 tactattcccaggacatacctggaagtaagctatgggctagaaggaagagagtgcttgag 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tactattcccaggacatacctggaagtaagctatgggctagaaggaagagagtgcttgag 615
Query: 369 ctccttggagccagaactgcaggaagataaggaaaaagcctgggagaatgtgttgcctaa 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ctccttggagccagaactgcaggaagataaggaaaaagcctgggagaatgtgttgcctaa 555
Query: 429 actgaaccaagaggtggggtttgttttcacagggggtttggtgcaatatgggaattcaca 488
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 554 actgaaccaagaggtggggtttattttcacagggggtttggtgcaatatgggaattcaca 495
Query: 489 ggctttcaaagcccccatacttctgt 514
||||||||||||||||||||||||||
Sbjct: 494 ggctttcaaagcccccatacttctgt 469
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_k18.g1 MSMg01no367_k18.g1 CHROMAT_FILE:
MSMg01no367_k18.g1 PHD_FILE: MSMg01no367_k18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:54 2005
(447 letters)
>mm_chr10_65965776_65966628
Length = 853
Score = 806 bits (417), Expect = 0.0
Identities = 442/453 (97%), Gaps = 6/453 (1%)
Strand = Plus / Plus
Query: 1 tacaaaattcaccaaccttgaaagccagctagggatgagggatgctcaaacccttcctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacaaaattcaccaaccttgaaagccagctagggatgagggatgctcaaacccttcctaa 260
Query: 61 caaacagagaaataatattcacagcatattgttgtagatactgaagactgcagtatgcat 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 caaacagagaaataatattcacagcatattgttgtagatactgaaggctgcagtatgcat 320
Query: 121 tactgaactattgcagtttgtcacactcgctgacctcttccctgtgcatcatgggtttgt 180
| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 tcccgaactattgcagtttgtcacactcgccgacctcttccctgtgcatcatgggtttgt 380
Query: 181 tatgtcaacaatggcaggccagtggtcacctgctcctagactggtaggtgatagtgatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatgtcaacaatggcaggccagtggtcacctgctcctagactggtaggtgatagtgatac 440
Query: 241 ccagtaacatgggtagaggttcctgaactgacagaatgccttagtaaccatgattaccac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccagtaacatgggtagaggttcctgaactgacagaatgccttagtaaccatgattaccac 500
Query: 301 ggccaaatacagatgaatgaggctgggggggggg-cggggggg-----ctctcgctctgt 354
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 501 ggccaaatacagatgaatgaggctgggggggggggcgggggggggaggctctcgctctgt 560
Query: 355 ggaataagtgctaactgaggaaaaatggcaagaatgaatctgagcatgtaagtcctgagt 414
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 ggaataagtgctaactgaggaaaaacggcaagaatgaatctgagcatgtaagtcctgagt 620
Query: 415 ttgtttccactctcttcttgttccatttaatat 447
|||||||||||||||||||||||||||||||||
Sbjct: 621 ttgtttccactctcttcttgttccatttaatat 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 853
Length adjustment: 10
Effective length of query: 437
Effective length of database: 843
Effective search space: 368391
Effective search space used: 368391
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
