Query= MSMg01no367_m06.b1 MSMg01no367_m06.b1 CHROMAT_FILE:
MSMg01no367_m06.b1 PHD_FILE: MSMg01no367_m06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:01 2005
(491 letters)
>mm_chr10_122410676_122411565
Length = 890
Score = 911 bits (471), Expect = 0.0
Identities = 483/487 (99%), Gaps = 1/487 (0%)
Strand = Plus / Minus
Query: 5 gaattcatcctctgtctgtctcgttggtaatgcctgcagtgagcattggttccgcagagc 64
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gaattcatcctcggt-tgtctcgttggtaatgcctgcagtgagcattggttccgcagagc 632
Query: 65 acagagaatagccttaatatgtcccccaaagttcttagacaggggaggtgttttacagac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 acagagaatagccttaatatgtcccccaaagttcttagacaggggaggtgttttacagac 572
Query: 125 gcttgctggttgatgtattagaaaaggcatttttaatatacacccataaatttctctctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gcttgctggttgatgtattagaaaaggcatttttaatatacacccataaatttctctctt 512
Query: 185 actctctctgctttcttctgtatcctgcagaagtgtttaccattgctgactctgagtgga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 actctctctgctttcttctgtatcctgcagaagtgtttaccattgctgactctgagtgga 452
Query: 245 ggttttctgtagtcagggaaatagcactcgttaccagcttaaagtaataatcaggagaca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ggttttctgtagtcagggaaatagcactcgttaccagcttaaagtaataatcaggagaca 392
Query: 305 gcgcagagaaacaacgagcagaagttgttattctctttgagaatgactctttcatcattt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gcgcagagaaacaacgagcagaagttgttattctctttgagaatgactctttcatcattt 332
Query: 365 cagctcagtctttctaggtttcgatgtcaactttgtagaaagacaaaaaccaaacccagc 424
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 331 cagctcagtctttctaggtttcgatgtcaactttgtagaaagacaaaaaacaaacccagc 272
Query: 425 cggtctaagtcatttcttgctgactgaagtctaactaatgtgtgacttgagaccacactg 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tggtctaagtcatttcttgctgactgaagtctaactaatgtgtgacttgagaccacactg 212
Query: 485 gcttggg 491
|||||||
Sbjct: 211 gcttggg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 890
Length adjustment: 10
Effective length of query: 481
Effective length of database: 880
Effective search space: 423280
Effective search space used: 423280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_m06.g1 MSMg01no367_m06.g1 CHROMAT_FILE:
MSMg01no367_m06.g1 PHD_FILE: MSMg01no367_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:01 2005
(530 letters)
>mm_chr10_122254148_122255079
Length = 932
Score = 955 bits (494), Expect = 0.0
Identities = 522/532 (98%), Gaps = 2/532 (0%)
Strand = Plus / Plus
Query: 1 ctacagcaagtctgaacttccatgaggataggatctagatattaaacaagacttacattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctacagcaagtctgaacttccatgaggataggatctagatattaaacaagacttacattt 260
Query: 61 ctgaattcaaaagcaattacccgtctgtggtgtcttctctcataggcctctcccctctgc 120
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 261 ctgaattcaaaagcaattacccgtctgtggtatcttctctcctaggcctctcccctctgc 320
Query: 121 tgatggaaagataataaaacctgatataactgcctccggccctggagaccataaaggact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgatggaaagataataaaacctgatataactgcctccggccctggagaccataaaggact 380
Query: 181 gctcattctttgttttatgtgcctgggtttcaccagtggccactgcagcccttttgcaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctcattctttgttttatgtgcctgggtttcaccagtggccactgcagcccttttgcaga 440
Query: 241 gctcctcgttgcttctaagtgcttcgtctatccttgcctaccagcctacccctgtgatag 300
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctcctcgttgctcctaagtgtttcgtctatccttgcctaccagcctacccctgtgatag 500
Query: 301 gagcctttctctgggtccagaaatacacttgatctgcttccattggctgcttcaagccta 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagcctttctctgagtccagaaatacacttgatctgcttccattggctgcttcaagccta 560
Query: 361 tgacacttctcattttctttgacatgtatcaaaaaaaaaaatagcacagacctaaagtga 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 tgacacttctcattttctttgacatgtatcaaaaaaaaaaatagcacagaactaaagtga 620
Query: 421 ctaaactgcccttttttttt--aaatctcaggatattccttagcactgcccaaagcctgt 478
|||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 ctaaactgccttttttttttttaaatctcagtatattccttagcactgcccaaagcctgt 680
Query: 479 ggaaggggttaagaggaagaaaataatatagtcagatggtcacaagtacacg 530
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggaaggggttaagaggaagaaaataatatagtcagatggtcacaagtacacg 732
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 932
Length adjustment: 10
Effective length of query: 520
Effective length of database: 922
Effective search space: 479440
Effective search space used: 479440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
