Query= MSMg01no367_p23.b1 MSMg01no367_p23.b1 CHROMAT_FILE:
MSMg01no367_p23.b1 PHD_FILE: MSMg01no367_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:19 2005
(142 letters)
>mm_chr10_110769002_110769543
Length = 542
Score = 244 bits (126), Expect = 2e-69
Identities = 135/138 (97%)
Strand = Plus / Plus
Query: 5 gaattcttccccatgtgttacagctcagtaaagacagccactgtcagacagtccttggtg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttccccatgtgttacagctcagtaaagacagccactgtcagacagtccttggtg 264
Query: 65 aagtcactgtgtgctttattccactcggttggggctttataaatcttggggagtgggata 124
|||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||
Sbjct: 265 aagtcactgtgtgctttattccactcagatggggctttataaatcttggggaatgggata 324
Query: 125 ggatttagggggtagatg 142
||||||||||||||||||
Sbjct: 325 ggatttagggggtagatg 342
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 142
Length of database: 542
Length adjustment: 8
Effective length of query: 134
Effective length of database: 534
Effective search space: 71556
Effective search space used: 71556
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no367_p23.g1 MSMg01no367_p23.g1 CHROMAT_FILE:
MSMg01no367_p23.g1 PHD_FILE: MSMg01no367_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:19 2005
(492 letters)
>mm_chr10_110811366_110812257
Length = 892
Score = 866 bits (448), Expect = 0.0
Identities = 477/489 (97%), Gaps = 4/489 (0%)
Strand = Plus / Minus
Query: 4 tcagctatgtgaggagttctgaggccactctaaagcctggagaagctgccttcaaacaaa 63
||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 770 tcagctacgtgaggagttctgaggccactctaaagcctggagaagctgcct----acaaa 715
Query: 64 caaacaaacaaacaaacaaacaccaagatagatgttgtagtgattttcctatcaatcccc 123
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 714 caaacaaacaaacaaacaaacaccaagatagatgttgtagtgattttcctattaatcccc 655
Query: 124 tgtgcttcagctctctgtcttgctttagttaactgcctcccccgcccccagcccctttca 183
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 tgtgcttcagctctgtgtcttgctttagttaactgcctcccccgcccccagcccctttca 595
Query: 184 tgcctgttcacttgctgactgtcctgctttctgagccagctatcttgtcactcactggat 243
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 594 tgcctgttcacttgctgactgtcctgctttcagagccagctatcttgtcactcactggat 535
Query: 244 ggacagaaacaaaccacagggcagggttctcttccagcaggtcccacttttgctcttaac 303
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 534 ggacagaaacaaaccacagggcaggcttctcttccagcaggtcccacttttgctcttaac 475
Query: 304 tttatgacactatgacttctgaagacctttaagaggtacattattaaacctttcttttta 363
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tttatgacaatatgacttctgaagacctttaagaggtacattattaaacctttcttttta 415
Query: 364 ttcaaaaggtaaaacagaatccatgggttttaggacataacgttgatggagctcttggac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ttcaaaaggtaaaacagaatccatgggttttaggacataacgttgatggagctcttggac 355
Query: 424 tgcttcctaacatgtaagtatccaataaatcattatttatancaacatatagactgacca 483
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 354 tgcttcctaacatgtaagtatccaataaatcattatttatacaaacatatagactgacca 295
Query: 484 cctattaag 492
|||||||||
Sbjct: 294 cctattaag 286
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space: 425124
Effective search space used: 425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
