Query= MSMg01no368_c13.b1 MSMg01no368_c13.b1 CHROMAT_FILE:
MSMg01no368_c13.b1 PHD_FILE: MSMg01no368_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:31 2005
(622 letters)
>mm_chr10_77220342_77221363
Length = 1022
Score = 520 bits (269), Expect = e-151
Identities = 538/631 (85%), Gaps = 24/631 (3%)
Strand = Plus / Minus
Query: 4 ggaatt-caggactgtgcgcagctg--gtggtcagatcctgccacttcacctatgtcctg 60
|||||| |||||||| | |||| || ||| |||||||| |||| ||| ||| || |||
Sbjct: 822 ggaattccaggactgagggcaggtgctgtg--cagatcctaccacctcatctaggtgctg 765
Query: 61 acccagtccct-gtcaccaacaaggt-aggagtagtgccttgagattccttgaccacacc 118
||||||| ||| |||||||||||||| | |||||| ||||||||||||||||||||| ||
Sbjct: 764 acccagt-cctggtcaccaacaaggtca-gagtagagccttgagattccttgaccacgcc 707
Query: 119 cacaggctgaccacagccctctgtaaattgcacagcctagggaacatcctagcaaccaca 178
|||||||||||||||| || |||||| ||||||| ||| || |||| |||||||| ||
Sbjct: 706 cacaggctgaccacagtccactgtaaggtgcacagactaagg-acattctagcaactgca 648
Query: 179 ggcacctcttctgaagagaaattgcctgctccagccacagtctacagctcagggtcacag 238
|||| ||| |||||| ||||| |||||||||||||| || | |||||||||||||||||
Sbjct: 647 ggcagctcacctgaagggaaatcgcctgctccagccatagcccacagctcagggtcacag 588
Query: 239 catcccagttctagaaagca-aaggtcccttctcaggtgactacctcccagtagcggtaa 297
||||||| ||||||| |||| |||||||||||||||||||| ||||||||| || |||||
Sbjct: 587 catcccatttctagagagcacaaggtcccttctcaggtgacaacctcccagcagtggtaa 528
Query: 298 agaataatgacagcttttatatctaccagttctgtcagacaagtcttttaaaatatcacc 357
||||||||||||||||| | |||||||||| ||||| |||| ||||||||||| ||||||
Sbjct: 527 agaataatgacagctttcacatctaccagtcctgtcggacaggtcttttaaaagatcacc 468
Query: 358 ttgagacaaaaatcaagggggggaag-ttag-aaagagtaagggagtcatttgggacact 415
|||||||| ||| || | | |||| || | |||| ||| ||||| | |||||||||||
Sbjct: 467 atgagacaataataaa--gagtgaagattggaaaag-gtaggggagacctttgggacact 411
Query: 416 gtcaatcatttgtgtcagcactacttgta-cctgtgagtgg-gatgagagaaaagttcag 473
|||||||||| |||||||||| ||| | | ||| | || || || |||| ||||| | ||
Sbjct: 410 gtcaatcattggtgtcagcaccactggcaccct-ttag-ggagaagagaaaaaaggtaag 353
Query: 474 agcatagaaaatctatacattggcattctagagaattctttaggacagacagggccaccc 533
|||||||||||||||||||||| |||||||| ||||| ||||||||||||||| ||||
Sbjct: 352 agcatagaaaatctatacattgatattctagaaaattccctaggacagacagggctaccc 293
Query: 534 agggaagggtccaaggtctaaagaaccttaattgaacacaaccaagccttc--catactg 591
||||||||||||||||||||||||||||||| || ||||||| ||||| || || | |
Sbjct: 292 agggaagggtccaaggtctaaagaaccttaactggacacaacaaagccctcacca--ccg 235
Query: 592 catatcgtctgcaaaggggagaagcatcaag 622
|| ||||||| ||||||||||||||||||||
Sbjct: 234 cacatcgtctacaaaggggagaagcatcaag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_c13.g1 MSMg01no368_c13.g1 CHROMAT_FILE:
MSMg01no368_c13.g1 PHD_FILE: MSMg01no368_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:31 2005
(534 letters)
>mm_chr10_77054233_77055169
Length = 937
Score = 953 bits (493), Expect = 0.0
Identities = 528/547 (96%), Gaps = 13/547 (2%)
Strand = Plus / Plus
Query: 1 tgtagttaaaaactgtaccacccactgatgccgatgaagagcttctttctaaccacacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtagttaaaaactgtaccacccactgatgccgatgaagagcttctttctaaccacacaa 260
Query: 61 gttgctactttctgcacactttgggactggcaccgtgggtagacggaacacgggatctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttgctactttctgcacactttgggactggcaccgtgggtagacggaacacgggatctga 320
Query: 121 gctgctgcaatgcctgctcctgagtttaacgagcttggaagctgaaaggagtctggtgga 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctgctgcaatgcctgcttctgagtttaacgagcttggaagctgaaaggagtctggtgga 380
Query: 181 ggagcgtgggccactgagctggggccggctgaggg---cctgcagcaagagggtttgaag 237
||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||
Sbjct: 381 ggagcatgggccactgagctggggctggctgagggagccctgcagcaagggggtttgaag 440
Query: 238 tgctttggtgcagggctgagcttagtgactgggcacactggcaaaagcacctcggggctc 297
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgctttggtgcagagctgagcttagtgactgggcacactggcaaaagcacctcggggctc 500
Query: 298 ttgaacttcctctggcttgagcacagtagtggaggatccttggctggatttctttttctt 357
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgaacttcctctggcttgagtacagtagtggaggatccttggctggatttctttttctt 560
Query: 358 tttttttctttt----------caagataaggtttttctgtgtagtcccggctctgaact 407
|||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttttttctttttttttcttttcaagataaggtttttctgtgtagtcccggctctgaact 620
Query: 408 ctctgtagaccaggccttgaactcagcgatctgcctgcctctgtcttgagtgctagactt 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctctgtagaccaggccttgaactcagcgatctgcctgcctctgtcttgagtgctagactt 680
Query: 468 aaagccatgggctagtgtgctcctcctggtgctccacctggtttctctgactgttatttg 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaagccatgggctagtgtgctcctcctggtgctccacctggtttctctgactgttatttg 740
Query: 528 tttgctt 534
|||||||
Sbjct: 741 tttgctt 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 937
Length adjustment: 10
Effective length of query: 524
Effective length of database: 927
Effective search space: 485748
Effective search space used: 485748
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
