Query= MSMg01no368_c14.b1 MSMg01no368_c14.b1 CHROMAT_FILE:
MSMg01no368_c14.b1 PHD_FILE: MSMg01no368_c14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:32 2005
(636 letters)
>mm_chr10_44834624_44835656
Length = 1033
Score = 1048 bits (542), Expect = 0.0
Identities = 611/636 (96%), Gaps = 11/636 (1%)
Strand = Plus / Minus
Query: 5 gaattcctcttttgtctaaaaacctagtaaaagactagtgagtcttctagataaattcag 64
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 gaattcctctttagtgtaaaaacctagtaaaagactagtgagtcttctagataaattcag 774
Query: 65 ttttcatacag-tcatttgtaagtcagcatattatttttgataagatgagtaggtgcctg 123
||||||||| | |||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 773 ttttcatac-gctcatttataagtcagcatattatttttgataagatgagtaagtgcctg 715
Query: 124 tggcagctttcaattaaaaacaggggccgtctattctc-ttttctagcaagatagctgga 182
||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||
Sbjct: 714 tggcagctttcaattaaaaacaggggcagtctattctctttttctagcaagatggctgga 655
Query: 183 agtccacccgcacatctacaacaggtaaaaacaaacaggtaaggtgatagaaaagtttaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 agtccacccgcacatctacaacaggtaaaaacaaacaggtaaggtgatagaaaagtttaa 595
Query: 243 agctaagagctgttactccttttaattagacagcacacactgtttaaggatggccatcct 302
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 594 agctaagagctgttactccttttagttagacagcacacactgtttaaggatggccatcct 535
Query: 303 aataattacaagccacaagc-tctgtacagagtcagcagaccacggaggaccgacttttc 361
|||||||||||||| || || |||| ||||||||||||| ||||||| ||||||||
Sbjct: 534 aataattacaagcc---tgcttc-gtac--agtcagcagaccatggaggactgacttttc 481
Query: 362 gacgttctcgcaagcacagtttccaagcagctgcctgccttacctaagacatccttctcg 421
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gatgttcttgcaagcacagtttccaagcagctgcctgccttacctaagacatccttctcg 421
Query: 422 tgctccggaacgagcactttccacttggactcgtcagggtccgtgaagtcaatattgatc 481
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 420 tgctccggtacgagcactttccacttggactcgtcagggtccgtgaagtcgatattgatc 361
Query: 482 agccgataattgggagaattgcggttcgtcttgaatgtgaacactgtgccctcgttggtt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 agccgataattgggagaattgcggttcgtcttgaatgtgaacactgtgccctcgttggtt 301
Query: 542 acgtagtcgtattctccttcaaagttgtctatcagttttacccacttcaggattcctggg 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 acgtagtcgtattctccttcaaagttgtctatcagttttacccacttcaggattcctggg 241
Query: 602 aagaaagc-agcacttctatcatctgatcctgggag 636
|||||||| |||||||||||||||||||||||||||
Sbjct: 240 aagaaagcaagcacttctatcatctgatcctgggag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1033
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1023
Effective search space: 640398
Effective search space used: 640398
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_c14.g1 MSMg01no368_c14.g1 CHROMAT_FILE:
MSMg01no368_c14.g1 PHD_FILE: MSMg01no368_c14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:32 2005
(551 letters)
>mm_chr10_44650132_44651082
Length = 951
Score = 1027 bits (531), Expect = 0.0
Identities = 546/551 (99%)
Strand = Plus / Plus
Query: 1 ggtaggagaaaaagggaggagccagacatgaactcttgccacccacacttgtaggaactg 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 ggtaggagaaaaagggaggagccagacatgaactcttgccacccacatttgtaggaactg 260
Query: 61 gcttgtggctgtgacactgcagagcagggataggtgtgggggacaccgcaggggctgtga 120
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 gcttgtgtctgtgacactgcagagcagggataggtgtgggggacaccacaggggctgtga 320
Query: 121 tgccagaggtgacacctaacaatacggctgctgtggtgtgagctaattctactgctgtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgccagaggtgacacctaacaatacggctgctgtggtgtgagctaattctactgctgtga 380
Query: 181 tttgatgtgcagtccttcaaaaggccttggagtttccttactacctgtaaatgtgacttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgatgtgcagtccttcaaaaggccttggagtttccttactacctgtaaatgtgacttt 440
Query: 241 atttggaaataggttctttgtagctcaccagattactataaggtcatttgagtcggtccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 atttggaaataggttctttgtagctcaccagattactataaggtcatttgagtgggtccc 500
Query: 301 aactcaattatgactatcttcttattttttaaaaaatcagggattgggaactagacaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aactcaattatgactatcttcttattttttaaaaaatcagggattgggaactagacaaag 560
Query: 361 aaccagatgtctgtacaggaagaatgccatgtgaacaagaaggcagagattgaagcaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaccagatgtctgtacaggaagaatgccatgtgaacaagaaggcagagattgaagcaatg 620
Query: 421 ccttctcaaaccaaggagtgccagaaaaccaccagaagctagggagaggcctggaacaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccttctcaaaccaaggagtgccagaaaaccaccagaagctagggagaggcctggaacaga 680
Query: 481 tccacccacacagccctcagaaaggctaaccctgccaacaccttgatctcagacttttag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tccacccacacagccctcagaaaggctaaccctgccaacaccttgatctcagacttttag 740
Query: 541 tctctggaacg 551
|||| ||||||
Sbjct: 741 tctccggaacg 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
