Query= MSMg01no368_e07.b1 MSMg01no368_e07.b1 CHROMAT_FILE:
MSMg01no368_e07.b1 PHD_FILE: MSMg01no368_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:40 2005
(583 letters)
>mm_chr10_4499970_4500952
Length = 983
Score = 963 bits (498), Expect = 0.0
Identities = 557/577 (96%)
Strand = Plus / Minus
Query: 4 ggaattctctctgtacacctggttagtcttgaactcacagagatcagtctgcttctgcct 63
||||||||||||||| ||| || |||||||||||||||||||||||| ||||||||||||
Sbjct: 859 ggaattctctctgtagaccaggctagtcttgaactcacagagatcagcctgcttctgcct 800
Query: 64 ccagtgttgggagtaaaggtaggtaggtaacattttaagtgaacattcctatcttccaat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ccagtgttgggagtaaaggtaggtaggtaacattttaagtgaacattcctatcttccaat 740
Query: 124 ctaagacacaaagacaatgacacacatccagtgttcactctgggaatcttgatcaaagtc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ctaagacacaaagacaatgacacacatccagtgttcactctgggaatcttgatcaaagtc 680
Query: 184 taaacactttagggaggggaaacatcaacaactcaggctagagttagcaaagcaagtgtg 243
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 taaacactctagggaggggaaacatcaacaactcaggctagagttagcaaagcaagtgtg 620
Query: 244 gagattagagtctgttaagatgaagaaggaggaaaagtgtttagtccattccagagaata 303
|||||||||| ||| ||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 619 gagattagagcctggtaagatgaagagggaggaaatgtgtttagtccatttcagagaata 560
Query: 304 aggacagtgggcgctgtctgtggatggtggactgtttgtagagaacactgtggattgtct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aggacagtgggcgctgtctgtggatggtggactgtttgtagagaacactgtggattgtct 500
Query: 364 cgggagagaaacgtctgaagccaacgatgggtttcctcactcatcatcagagccagtgca 423
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 499 cggaagagaaacgtctgaagccaacgatgggtttcctcactcattatcagagccagtaca 440
Query: 424 cagtccacttggaagatggttgattgttgtaagaaaacaatcagtccttagaaatgtcac 483
|||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||
Sbjct: 439 cagtccacttggaagatggtcgatcgttgtaagaaaacaattagtccttagaaatgtcac 380
Query: 484 tagaagagagtggtaaacagctcanaacctttgcagtagccatggtggtgtgggagtatc 543
|||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||| |
Sbjct: 379 tagaagagagtggtaaacagctcaaaacctttgcagtagccgtggtgatgtgggagtagc 320
Query: 544 agatgatatacttatgtaacatacatgcgaggaatca 580
|||||||||||||||||||||||||||||||||||||
Sbjct: 319 agatgatatacttatgtaacatacatgcgaggaatca 283
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_e07.g1 MSMg01no368_e07.g1 CHROMAT_FILE:
MSMg01no368_e07.g1 PHD_FILE: MSMg01no368_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:40 2005
(517 letters)
>mm_chr10_4348210_4349126
Length = 917
Score = 936 bits (484), Expect = 0.0
Identities = 508/516 (98%)
Strand = Plus / Plus
Query: 1 tctaaaatactggattataagtacagtgctttaaaaattagaaaactggctgttatacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctaaaatactggattataagtacagtgctttaaaaattagaaaactggctgttatacaa 260
Query: 61 atgtatcacttattaaagtagctttgtcaaaaggaaaagaaaagaagagaaaagaaaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtatcacttattaaagtagctttgtcaaaaggaaaagaaaagaagagaaaagaaaaga 320
Query: 121 aagtagctttgttattttaattcaaaagcactttgtcacaaaatcaactcagagccattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtagctttgttattttaattcaaaagcactttgtcacaaaatcaactcagagccattg 380
Query: 181 taaaacaatttaaattatagtcctctcttttgcctagggaaaacaactgctatcagaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaacaatttaaattatagtcctctcttttgcctagggaaaacaactgctatcagaatt 440
Query: 241 taagttatatatttatatttattttttattctttaatcttttttatagtcctgtctttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taagttatatatttatatttattttttattctttaatcttttttatagtcctgtctttat 500
Query: 301 acccccatctgccctctgactgttatttattccatatctcctccccccaactcctgagtg 360
||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 acccccatccgccctctgactgttatttattccatatctcctccccccaactgctgagtg 560
Query: 361 ccctcaggatgtccccatcctcccactcccaccccaccagacctccccagcccctggggt 420
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 561 ccctcaggatgtccccatcctcccactcccaccctaccagacctccccaacccctggggt 620
Query: 421 ttcaagtctcttgagggttaggtgcatcttctctgactgaggccagaccaggcagtcctc 480
||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 621 ctcaggtctcttgagggttaggtgcatcttctctcactgaggccagaccaggcagtcctc 680
Query: 481 tgctgtatatgagttgggggcctcatatgagctggt 516
|||||||||||||||||||||||||||| |||||||
Sbjct: 681 tgctgtatatgagttgggggcctcatattagctggt 716
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
