Query= MSMg01no368_i08.b1 MSMg01no368_i08.b1 CHROMAT_FILE:
MSMg01no368_i08.b1 PHD_FILE: MSMg01no368_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:59 2005
(572 letters)
>mm_chr10_22707637_22708607
Length = 971
Score = 1075 bits (556), Expect = 0.0
Identities = 568/572 (99%), Gaps = 1/572 (0%)
Strand = Plus / Plus
Query: 1 ctccctgtagtgaaggcgatccatcatttgacctgtgttcctcttctcctcctccccgtt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 ctccctgtagtgaaggcgatccatcatttgacctgtgttcctcttctcctcctccctgtt 260
Query: 61 tcactccatcattatcctcctgtgctttcttggataaccccttaaaaacatcaataagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcactccatcattatcctcctgtgctttcttggataaccccttaaaaacatcaataagga 320
Query: 121 ggcctttcttagtggctttaaaaaaaaagagaaatcaatgctaaagtagattagatatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcctttcttagtggctttaaaaaaaaagagaaatcaatgctaaagtagattagatatga 380
Query: 181 gacgagagctggggaataaaatggataaaaatggtagtttttctttctttcacaagagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacgagagctggggaataaaatggataaaaatggtagtttttctttctttcacaagagac 440
Query: 241 taaaagtaaaaaatgtgacagatataagtctcatgcgtttattctgtggaccctaggcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaaagtaaaaaatgtgacagatataagtctcatgcgtttattctgtggaccctaggcat 500
Query: 301 aaagtaaaataattttgttgcttgaaaaagaaaaaaaaaggtgaaccattatcaccctcc 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 aaagtaaaataattttgttgcttgaaaaagaaaaaaaa-ggtgaaccattatcaccctcc 559
Query: 361 aatttattttcgattgagtgagtttctagcacttggcctcgactcagtcccggtcccaag 420
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 560 aatttattttcgattgagtgagtttccagcacttggcctcgactcagtcccggtcccaag 619
Query: 421 ggaaatgaaagaagtgttctcattgttgtatttctcaagaagccacttcgagccaggctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggaaatgaaagaagtgttctcattgttgtatttctcaagaagccacttcgagccaggctc 679
Query: 481 agagctatgctcaccttatcaacattataaaatggtttcccctttatatgacaagcattt 540
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 680 agagctatgctcaccttatcaacattataaaatggtttctcctttatatgacaagcattt 739
Query: 541 atcaacaaatcagttttagtgttttaacttta 572
||||||||||||||||||||||||||||||||
Sbjct: 740 atcaacaaatcagttttagtgttttaacttta 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 971
Length adjustment: 10
Effective length of query: 562
Effective length of database: 961
Effective search space: 540082
Effective search space used: 540082
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_i08.g1 MSMg01no368_i08.g1 CHROMAT_FILE:
MSMg01no368_i08.g1 PHD_FILE: MSMg01no368_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:59 2005
(471 letters)
>mm_chr10_22826398_22827271
Length = 874
Score = 814 bits (421), Expect = 0.0
Identities = 458/471 (97%), Gaps = 3/471 (0%)
Strand = Plus / Minus
Query: 1 catagtaataatgatagtgataaagcttcatgttaaaacaagatagcgtttccatatata 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 671 catagtaataatgatagtgataaagcttcatgttaaaacaagatatcgtttccatatata 612
Query: 61 taatttccactgcatacaagactacattctatttatatacatcttagaagatgtcctaag 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tagtttccactgcatacaagactacattctatttatatacatcttagaagatgtcctaag 552
Query: 121 ttcaatgtaatatttaatgttattgatttgcaattgactgaagtata-ttttttcattgt 179
|||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||| |
Sbjct: 551 ttcaatgtaataattaatgttattgttttgcaattgactgaagtatatttttttcattat 492
Query: 180 tattatttccagtgagatttcctcaggtattatttccaatcaatcttttctgtaaactct 239
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 491 tattatttccagtgagatttcctcaggtattacttccaatcaatcttttctgtaaactct 432
Query: 240 gagtaccacaactgtagtttatattagcacatctctggaaggccacaggcagcataccat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gagtaccacaactgtagtttatattagcacatctctggaaggccacaggcagcataccat 372
Query: 300 ttaatattctatctactcacttggaaatggtatgcacatccctgttaagattgcatcctc 359
||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ttagtattctgtctacccacttggaaatggtatgcacatccctgttaagattgcatcctc 312
Query: 360 tccctctccatcttgtacacatgaaataaaccaaaccatctcctagcttaagttattagt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tccctctccatcttgtacacatgaaataaaccaaaccatctcctagcttaagttattagt 252
Query: 420 catctgaggcaagtaagaata--atcaattctcatatttttattttcctta 468
|||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 251 tatctgaggcaagtaagaatatgatcaattctcatatttttattttcctta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 874
Length adjustment: 10
Effective length of query: 461
Effective length of database: 864
Effective search space: 398304
Effective search space used: 398304
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
