Query= MSMg01no368_k15.b1 MSMg01no368_k15.b1 CHROMAT_FILE:
MSMg01no368_k15.b1 PHD_FILE: MSMg01no368_k15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:10 2005
(527 letters)
>mm_chr10_66994580_66995505
Length = 926
Score = 1004 bits (519), Expect = 0.0
Identities = 525/527 (99%), Gaps = 1/527 (0%)
Strand = Plus / Plus
Query: 1 aaactcagaacttggagagaaataccatgaatcctcccttcctccatatctgaagaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaactcagaacttggagagaaataccatgaatcctcccttcctccatatctgaagaaaag 260
Query: 61 ctgttctgcttttatttgatgtgagctgtgcatcgcatgagctcaaaacacacagctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgttctgcttttatttgatgtgagctgtgcatcgcatgagctcaaaacacacagctctg 320
Query: 121 aggccaatgcaacaaagtccatattctgggtctgcatcttgctgcagagacttgggcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggccaatgcaacaaagtccatattctgggtctgcatcttgctgcagagacttgggcatg 380
Query: 181 tcatgtcccctccctaaggcttcgcccccacatatatgaaacagaagagattagccgtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcatgtcccctccctaaggcttcgcccccacatatatgaaacagaagagattagccgtgt 440
Query: 241 tctttcaggttgttttatgagggacacagtgatgaagctagaatgataaagttgtgtctg 300
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctttcaggttggtt-atgagggacacagtgatgaagctagaatgataaagttgtgtctg 499
Query: 301 gtgcatagcattaagcaatgaaagtcatttaataagtaacaattattgcatatttaatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtgcatagcattaagcaatgaaagtcatttaataagtaacaattattgcatatttaatat 559
Query: 361 gcagcaatagtgtgctggcagcttcccattactgtatttaatcatcacaataacttgatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gcagcaatagtgtgctggcagcttcccattactgtatttaatcatcacaataacttgatg 619
Query: 421 gtcattccattcactttccagatgaaggaaccagggcagagcagctatgaaatgtggtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gtcattccattcactttccagatgaaggaaccagggcagagcagctatgaaatgtggtga 679
Query: 481 aggtacacacagccaggagtggcaacgttgggatttgaatggaaaac 527
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aggtacacacagccaggagtggcaacgttgggatttgaatggaaaac 726
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 926
Length adjustment: 10
Effective length of query: 517
Effective length of database: 916
Effective search space: 473572
Effective search space used: 473572
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_k15.g1 MSMg01no368_k15.g1 CHROMAT_FILE:
MSMg01no368_k15.g1 PHD_FILE: MSMg01no368_k15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:10 2005
(452 letters)
>mm_chr10_67188754_67189605
Length = 852
Score = 866 bits (448), Expect = 0.0
Identities = 451/452 (99%)
Strand = Plus / Minus
Query: 1 agacctacggaagtgatggagatgcagtcacatctgggaagtcttcccttttggaatgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 agacctacggaagtgatggagatgcagtcacatctgggaagtcttcccttttggaatgtg 593
Query: 61 cattccacagaggctgagcttgtggcttctcagccgtctcctcggtgactaatgcccctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 cattccacagaggctgagcttgtggcttctcagccgtctcctcggtgactaatgcccctg 533
Query: 121 atacacggagtctactttctgaattgcttgggattgtctccatatcaaatgtgccaactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 atacacggagtctactttctgaattgcttgggattgtctccatatcaaatgtgccaactc 473
Query: 181 actggtgtgttcctgaagctctggctatttcataaacagcttgaatgcaattcaccctag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 actggtgtgttcctgaagctctggctatttcataaacagcttgaatgcaattcaccctag 413
Query: 241 tggcccttactgtaggatgcacttagattcaaaatattcatgccagattctcgctggatg 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tggcccttacagtaggatgcacttagattcaaaatattcatgccagattctcgctggatg 353
Query: 301 aagaaatgttaactactcattaggatgaagacgcactatgtctaaagatgtttaaatgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 aagaaatgttaactactcattaggatgaagacgcactatgtctaaagatgtttaaatgta 293
Query: 361 attttcaattttaaaaaatcattggaatacatttgacagcatcaaaaatcactctaggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 attttcaattttaaaaaatcattggaatacatttgacagcatcaaaaatcactctaggat 233
Query: 421 tttgtctttctatgaagacattttgcaaggaa 452
||||||||||||||||||||||||||||||||
Sbjct: 232 tttgtctttctatgaagacattttgcaaggaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
