Query= MSMg01no368_n22.b1 MSMg01no368_n22.b1 CHROMAT_FILE:
MSMg01no368_n22.b1 PHD_FILE: MSMg01no368_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:26 2005
(502 letters)
>mm_chr10_126417790_126418694
Length = 905
Score = 930 bits (481), Expect = 0.0
Identities = 497/503 (98%), Gaps = 3/503 (0%)
Strand = Plus / Minus
Query: 3 ggaattcctaaacgattcttaagatgcaggt--tgtttgtaaatgatgtccaactcagct 60
||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 705 ggaattcctaaacgagtgttaagatgcaggttctgtttgtaaatgatgtccaactcagct 646
Query: 61 agttggcatggttgctgggtgccaagctgctcagaagcaagcacgccttcccagagaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 agttggcatggttgctgggtgccaagctgctcagaagcaagcacgccttcccagagaatg 586
Query: 121 caattgaagaaaagggga-gggggagagacaccaagaggctgctggctggagaattcaga 179
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 caattgaagaaaaggggaggggggagagacaccaagaggctgctggctggagaattcaga 526
Query: 180 ttcctccagggagaaatgtgaaggacaaactacacacaaaaaagaaaacaaaactgtaac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ttcctccagggagaaatgtgaaggacaaactacacacaaaaaagaaaacaaaactgtaac 466
Query: 240 tccaagaaaactcaaccagcaacctgacacggtcaggagccagctgctctgctctccgct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tccaagaaaactcaaccagcaacctgacacggtcaggagccagctgctctgctctccgct 406
Query: 300 gcctgtcactcatcctgccggattaaacttcagctctgatttgctcagtgcagctacagc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gcctgtcactcatcctgccggattaaacttcagctctgatttgctcagtgcagctacagc 346
Query: 360 acagtcccgagtcttcttatcccgatgtggcccgccaccctcaagacacctaggagaccc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 acagtcccgagtcttcttatcccgatgtggcccgccaccctcaagacacctaggagaccc 286
Query: 420 tgcagggcgcacaggtgggaaggaggcacacgccatgcgggcttcttgtcactaccccct 479
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 285 tgcagggcgcacaggtgggaaggaggcacacgccatgccggcttcttgtcactaccccct 226
Query: 480 cctcttatgtcctttcccatcct 502
|||||||||||||||||||||||
Sbjct: 225 cctcttatgtcctttcccatcct 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 905
Length adjustment: 10
Effective length of query: 492
Effective length of database: 895
Effective search space: 440340
Effective search space used: 440340
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_n22.g1 MSMg01no368_n22.g1 CHROMAT_FILE:
MSMg01no368_n22.g1 PHD_FILE: MSMg01no368_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:26 2005
(280 letters)
>mm_chr10_126253461_126254140
Length = 680
Score = 495 bits (256), Expect = e-144
Identities = 274/280 (97%)
Strand = Plus / Plus
Query: 1 ttgtagctctaagggagaaaacagactgaggggagagtccaggctgaacatggctggcag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 ttgtagctctaagggagaaaacagactgaggggagagtccaggctgaacatggccggcag 260
Query: 61 actaaagctaaccatgagaggagaggtttagggagagcaagagaggagactggtgtagcc 120
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 261 actaaagctaaccatgagagaagagggggagggagagcaagagaggagactggtgtagcc 320
Query: 121 aaaatgtctgagttaaatgggaatcgagcatacatcctgtgcaactggggcaaccacact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaatgtctgagttaaatgggaatcgagcatacatcctgtgcaactggggcaaccacact 380
Query: 181 tgttaacggaggtaaaaccacgaagcttgttggcttgttgtcttacgtgaacagcacctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttaacggaggtaaaaccacgaagcttgttggcttgttgtcttacgtgaacagcacctc 440
Query: 241 ctaccccaagggttctaggacatcatctgtcctcggacaa 280
||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 ctaccccaagggtcctaggacatcatctgtcctcggacaa 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
