Query= MSMg01no368_o01.b1 MSMg01no368_o01.b1 CHROMAT_FILE:
MSMg01no368_o01.b1 PHD_FILE: MSMg01no368_o01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:27 2005
(206 letters)
>mm_chr10_19313777_19314383
Length = 607
Score = 327 bits (169), Expect = 3e-94
Identities = 196/205 (95%), Gaps = 1/205 (0%)
Strand = Plus / Minus
Query: 1 atgtccttcccacttggttggcacccaaccaagctagggaaatgacccttcctctgggg- 59
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 405 atgtccttcccacttggttggcacccaaccaagctagggaaatgagccttcctctggggt 346
Query: 60 ttttgttgtgacagaagaagttgcaagattttaaaacccaaaggctactagcacatacca 119
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 345 ttttgttgtgacagaagaagttgcaagattttaaaacccaaaggctaccagcacacacca 286
Query: 120 ttcctgccaaatagagaatctgtcaataaccaggacaactagaaataaaaagtggttttt 179
|||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 285 ttcctgccaaatagggaatctgtcaataaccaggacaactagaaataaaaaatggtacat 226
Query: 180 ggtagctgctgcctcctcttcctcc 204
|||||||||||||||||||||||||
Sbjct: 225 ggtagctgctgcctcctcttcctcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 206
Length of database: 607
Length adjustment: 8
Effective length of query: 198
Effective length of database: 599
Effective search space: 118602
Effective search space used: 118602
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no368_o01.g1 MSMg01no368_o01.g1 CHROMAT_FILE:
MSMg01no368_o01.g1 PHD_FILE: MSMg01no368_o01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:27 2005
(584 letters)
>mm_chr10_19114848_19115831
Length = 984
Score = 946 bits (489), Expect = 0.0
Identities = 554/589 (94%), Gaps = 22/589 (3%)
Strand = Plus / Plus
Query: 1 acttagcatatacttgtgagaactgaccaaacagatgaagacaaatgcaatgattagtct 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 acttagcatatacttgtgagaactaaccaaacagatgaagacaaatgcaatgattagtct 260
Query: 61 tcattagtagctcgtgtaaattcatattttaaaaaaaggtgtaaaagatgctggtgagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcattagtagctcgtgtaaattcatattttaaaaaaaggtgtaaaagatgctggtgagat 320
Query: 121 ccacatctggggagtgtctatggaggcagttccagagaggactaaggaaagaagacctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 ccacatctggggagtgtctatggaggcagttccagagaggactaaggaaagaaaacctgc 380
Query: 181 tcgaaatacaggccccatcccacaggcttgcttctggactaaatgcaaagggaaaatgaa 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 tcgaaatacaggccccatcccacaggcttggttctggactaaatgcaaagggaaaatgaa 440
Query: 241 tgttcaaagccacttttctttccttcttaatccccaaacttgggaggaaagagcctcctg 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgttcaaagccacttttttttccttcttaatccccaaacttgggaggaaagagcctcctg 500
Query: 301 ctgcctgctgtcctgccttcccagccctgaccggtgcatccc-----ttgccccacaaac 355
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 501 ctgcctgctgtcctgccttcccagccctgaccggtgcgtcccgtcccttgccccacaaac 560
Query: 356 cagcaaaacctcctcatgttgcttcctgccaagcatttgcaaagaagtcgttaatgcaca 415
||| ||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 561 cagtaaaacctcctcatgttgcttcttgccaagcatttgca-----------------ca 603
Query: 416 gctttctacagaacagcagtagctagaaagacctctgcgaggaatctttccagtttcttg 475
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 604 gctttctacagaacagcagtagctggaaaggcctctgcgaggaatctttccagtttcttg 663
Query: 476 tttagcattatggtccaggagacccccaggtatcacactggatgacttccaaagcctccc 535
||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||
Sbjct: 664 tttagcattatggtccaggagacccccaggtattacactggatggcttcctaagcctccc 723
Query: 536 acttccaatctgtacattcccacttcctgtcaagggcttattacctgcc 584
||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 724 acttccaatctgtacattcccacttcctgtcaagggcgtattacctgcc 772
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
