Query= MSMg01no369_b21.b1 MSMg01no369_b21.b1 CHROMAT_FILE:
MSMg01no369_b21.b1 PHD_FILE: MSMg01no369_b21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:45 2005
(204 letters)
>mm_chr10_9527122_9527725
Length = 604
Score = 379 bits (196), Expect = e-110
Identities = 202/204 (99%)
Strand = Plus / Minus
Query: 1 gaccttccagaatctcttctcctagtaagcacgtggtgaacagaatggtcatataataaa 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 404 gaccttccagaatctcttctcctagtaagcacgtggtgatcagaatggtcatataataaa 345
Query: 61 aaagtcactccccccaaaaggcaagcagacttaaagaaagatcacagttatgtttaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aaagtcactccccccaaaaggcaagcagacttaaagaaagatcacagttatgtttaaagt 285
Query: 121 ccatgctttacagagattcttcatgtgttcttgaaaacctgaccgtatggactttaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 284 ccatgctttacagagattcttcatgtgttcttgaaaacctgaccgtatgaactttaaagg 225
Query: 181 agtgactctcaagtaaggatgacc 204
||||||||||||||||||||||||
Sbjct: 224 agtgactctcaagtaaggatgacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 604
Length adjustment: 8
Effective length of query: 196
Effective length of database: 596
Effective search space: 116816
Effective search space used: 116816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no369_b21.g1 MSMg01no369_b21.g1 CHROMAT_FILE:
MSMg01no369_b21.g1 PHD_FILE: MSMg01no369_b21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:45 2005
(299 letters)
>mm_chr10_9353398_9354103
Length = 706
Score = 542 bits (280), Expect = e-158
Identities = 297/306 (97%), Gaps = 7/306 (2%)
Strand = Plus / Plus
Query: 1 agcatgaagctttctgttgatctgcaataattaacagccagtcagaacaggaacccaagg 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 agcatgaagctttctgttgatctgcagtaattaacagccagtcagaacaggaacccaagg 260
Query: 61 ctaggtccgctctcttttcagaggtttagtagtatggctgaggaagcgaaatggaagtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaggtccgctctcttttcagaggtttagtagtatggctgaggaagcgaaatggaagtga 320
Query: 121 gtt------agacaaggagcttagccacagttccagactgggagaagggatcccatggtg 174
||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttcaggatagacaaggagcttagccacagttccagactgggagaagggatcccatggtg 380
Query: 175 gggacacaggccaccaaggtgataaggactgctgatgtcaagagggataatggggtgagg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggacacaggccaccaaggtgataaggactgctgatgtcaagagggataatggggtgagg 440
Query: 235 tggggaagaggttctagaggggcctcaggaagactca-gagactaatgaccagaagggct 293
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 441 tggggaagaggttctagaggggcctcaggaagactcaagagacaaatgaccagaagggct 500
Query: 294 tagata 299
||||||
Sbjct: 501 tagata 506
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 706
Length adjustment: 9
Effective length of query: 290
Effective length of database: 697
Effective search space: 202130
Effective search space used: 202130
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
