Query= MSMg01no369_d22.b1 MSMg01no369_d22.b1 CHROMAT_FILE:
MSMg01no369_d22.b1 PHD_FILE: MSMg01no369_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:55 2005
(411 letters)
>mm_chr10_20580626_20581436
Length = 811
Score = 758 bits (392), Expect = 0.0
Identities = 404/408 (99%)
Strand = Plus / Plus
Query: 4 ggaattctgcagttacggacatcaccaaggtcatacctcacacttgcagagcatccatta 63
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgcagtaagggacatcaccaaggtcatacctcacacttgcagagcatccatta 263
Query: 64 gagagctgacatgaggtggaaactcaaagcctagatactgtctccctcaactgaagatga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gagagctgacatgaggtggaaactcaaagcctagatactgtctccctcaactgaagatga 323
Query: 124 tacagtgggggtataccaccaatatgccatgcagacattattcaggtatgtgtgcagaac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tacagtgggggtataccaccaatatgccatgcagacattattcaggtatgtgtgcagaac 383
Query: 184 acgaaagttggtagagatttttgctgaaggagcttaagaataccagccttgtgttctgaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acgaaagttggtagagatttttgctgaaggagcttaagaataccagccttgtgttctgaa 443
Query: 244 taaaagtgtttcaatttatgagactgctgtccagttttgttttgtctctgaatgacagca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 taaaagtgtttcaatttatgagactgctgtccagttttgttttgtctctgaatgacagca 503
Query: 304 ttccctagcctcaaaaacactgtgtctcaccatttctattggtttattggagggttggct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttccctagcctcaaaaacactgtgtctcaccatttctattggtttattggagggttggct 563
Query: 364 gagagttaagaaagatgtcctctttgtaatacaagtgagatgaatcag 411
|| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gattgttaagaaagatgtcctctttgtaatacaagtgagatgaatcag 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no369_d22.g1 MSMg01no369_d22.g1 CHROMAT_FILE:
MSMg01no369_d22.g1 PHD_FILE: MSMg01no369_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:55 2005
(449 letters)
>mm_chr10_20771699_20772547
Length = 849
Score = 576 bits (298), Expect = e-169
Identities = 318/326 (97%), Gaps = 4/326 (1%)
Strand = Plus / Minus
Query: 124 aactatcattaactgggaagtgcatttaatatacccaatctatccaataagcatggctta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 aactatcattaactgggaagtgcatttaatatacccaatctatccaataagcatggctta 790
Query: 184 tcctgacatactgtaaatgtaccttaagaattcatagtaagcctacacttggaaaaaaaa 243
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 789 tcctgaca---tgtaaatgtaccttaagaattcatagtaagcctacacttgg-aaaaaaa 734
Query: 244 tagtttattcacaatagtgtgttgaatattgcatacaattaattgaatattatgctagaa 303
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 733 tagtttattcacaatagtgtgttgaatattgcattcaattaattgaatattatgctagaa 674
Query: 304 gacagaatatctatacgggtacccttctgtaccaccctgagtgaggaccatggatagtcg 363
|||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 673 gacagaatatctatgcgggttcccttctgtaccaccctgagtgaggaccgtggatagtcg 614
Query: 364 aaacagaattttgtctttttctcagagccaagttgattgaacacactcttcagtgaaggg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aaacagaattttgtctttttctcagagccaagttgattgaacacactcttcagtgaaggg 554
Query: 424 ccaggaacaagttttgtttttatttg 449
||||||||||||||||||||||||||
Sbjct: 553 ccaggaacaagttttgtttttatttg 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
